| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3134 |
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| Symbol | |
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| ID | 7974344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3293566 |
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| End bp | 3294792 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793719 |
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| Product | CitB domain protein |
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| Protein accession | YP_002945019 |
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| Protein GI | 239816109 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02484] CitB domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.870392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGCAAC TCACTGACCT GGTCGCACGC GCCCGTGCGG ATGCCGATGG CATCGGCAGC
GCATCAGCGC GCGTCATTCC CATCCGGCCG GCGCTGCCGC TCGCCGCCAG CGAAGCCGAA
GTCGCGCGCA TCCTGCAGAT CTGCAACGCC TGCCGGTATT GCGAAGGCTT CTGCGCCGTG
TTCCCCGCAA TGACGCGGCG GCTGGAGTTC GGCAAGGCCG ACACGCACTA TCTGGCCAAC
CTGTGCCACA ACTGCGGCTC CTGCCTGCAT GCCTGCCAAT ATGCGCCGCC GCACGAGTTT
GCGGTGAACG TGCCGCAGGC GATGGCGCAG GTGCGCCTGC AGACCTACCA CGACTACGCC
TGGCCCCCTG CGATGGGCGC GCTCTACAAG AAGGCCGGGC TCACCGTCGC GCTGGCGCTG
GCCGGTGGAT TGGCGCTGTT CCTCGTGCTG GCCGTCGCGA TGTCGGGCTC GCTGCTGCAC
GAGCCGCTCG CGGGCAACTT CTACGCGATC TTCCCGCACA ACTTTCTCGC GCTGGTGTTC
GGCGCGGTGT TCGCCTTTGT GCTGTTCGCG CTGGCAATGG GCGTGCGGCG CTTCTGGCGC
GAGGTGTCGC CGACGCAGGA GAACGCGCCG GGCGAAGTGG CCGGCGTGCG CGCCGCGGCC
GGCGCCGAGG CCGCGCAGGA CGTGCTGCGC CTCAGCTACC TGGGCGGCGG CCACGGCGAA
GGCTGCAACA ACGAAGACGA CCGCTTCACG CCCTGGCGCC GGCGTTTCCA CCACTTCACC
TTCTACGGCT TCATGCTGTG CTTCGCCTCC ACCTGCGTGG CAACGCTCTA CCACTACCTG
CTGGGCCTGC ACGCGCCCTA TGCGCTCACG AGCCTGCCGG TGCTGCTGGG CACCGCAGGC
GGCATCGGCC TGGCGATCGG CCCGGCCGGG CTGCTGTGGC TGAACCTGCG GCGCAACGCG
GCGCATGGCG ACGTGGCCCA GCGGCCGATG GACCGCGGCT TCATCGCGCT GCTGCTGCTC
ACCAGCGCGA CCGGCCTGGC CCTGCTCGCC TGGCGCGACA CCGCCTTCAT GGCGCTGCTG
CTCGCGGTGC ACCTGGGCGT GGTGATGGCG CTGTTCCTCA CACTGCCCTA CGGCAAGTTC
GCGCACGGCA TCTTCCGCTC GGCGGCGCTG CTCAAGTTCG CGATCGAGAA ACGCCTGCCC
AGCCGCCTGC AGCTGGGTGC CGAGTGA
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| Protein sequence | MQQLTDLVAR ARADADGIGS ASARVIPIRP ALPLAASEAE VARILQICNA CRYCEGFCAV
FPAMTRRLEF GKADTHYLAN LCHNCGSCLH ACQYAPPHEF AVNVPQAMAQ VRLQTYHDYA
WPPAMGALYK KAGLTVALAL AGGLALFLVL AVAMSGSLLH EPLAGNFYAI FPHNFLALVF
GAVFAFVLFA LAMGVRRFWR EVSPTQENAP GEVAGVRAAA GAEAAQDVLR LSYLGGGHGE
GCNNEDDRFT PWRRRFHHFT FYGFMLCFAS TCVATLYHYL LGLHAPYALT SLPVLLGTAG
GIGLAIGPAG LLWLNLRRNA AHGDVAQRPM DRGFIALLLL TSATGLALLA WRDTAFMALL
LAVHLGVVMA LFLTLPYGKF AHGIFRSAAL LKFAIEKRLP SRLQLGAE
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