| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3132 |
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| Symbol | |
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| ID | 7974342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3291148 |
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| End bp | 3292074 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793717 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945017 |
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| Protein GI | 239816107 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.168013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCC GGCAACTGCG CTACTTCGTC AAGGTTTGCG AACTGCGCAG CATGGGCCGC
GCGGCCGTCG AGCTGGGCGT GGTCACCTCG GCGCTGAGCC AGCAGATCAG CCGGCTCGAA
GGCGAGCTTT CCACGCGCCT CTTGCAGCGC AGCTCGACCG GCGTGGTGCC CACCGATGCC
GGCCTGGCCT TCTTGCAGCA GGCGCAGCTC ACGCTGCGCC ATGCCGACGA TGCCGTGCGC
GCGGCGCAGC AGGCGCGCCT GTCGGGCCAT GTGAGCGTGG GCCTTGCGCC CACCACGGCC
ACCGTGCTGG GCGTGCCGCT GATGCGCGCC ATGCAGCAGC GCTACCCCGA GGTGCGGCTG
CACATGGTCG AGGCGCTGTC GGGCCATCTC ACGACGATGC TGCACGCGCG CCAGCTCGAC
CTGGCGGTGC TGTTCCAGAC CGATACGCCG CGGCGCTGGA GCGTGGCGCC GCTCCTGGCC
GAGAAGCTGT TCGTGATCGC ATCGCCGACG CTGGAGGGGC GCCCCACGGG CACCAAGGTC
CGCCTGTCGC AGCTCGCCGA GGTGCCGCTG ATCCTGCCGA GCGGCAGCCA CGGCCTGCGC
GCGACGCTGA TGGCGGCCTT TGCGCGGGCC TGCATCCAGC CGCGCATCGT TGCCGAGGTC
GACGGCCTCG CGCTGCTGAT GGACGCGGTG CGCGCGGGCT ACGGCGCCAC CGTGCAGCCC
GGCGCCGCCA CGGCCCGGCA TGACCGCGAC GACCTGGAGC TCACGCAGAT CAGCGATGCG
CACGTGGGCC GCCGCAACCT GCTCGTGAGC CTGTCGGACG ACGAGCTTTC GCCGGCCGCT
CTGGCCGCGC GCGTGGTGGT TGCCGACACG GCGCGCGCCC TGGTGCGCGA GGGGCGATGG
GCCGGGGCCA GTCTTCTCGA AAGCTGA
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| Protein sequence | MELRQLRYFV KVCELRSMGR AAVELGVVTS ALSQQISRLE GELSTRLLQR SSTGVVPTDA
GLAFLQQAQL TLRHADDAVR AAQQARLSGH VSVGLAPTTA TVLGVPLMRA MQQRYPEVRL
HMVEALSGHL TTMLHARQLD LAVLFQTDTP RRWSVAPLLA EKLFVIASPT LEGRPTGTKV
RLSQLAEVPL ILPSGSHGLR ATLMAAFARA CIQPRIVAEV DGLALLMDAV RAGYGATVQP
GAATARHDRD DLELTQISDA HVGRRNLLVS LSDDELSPAA LAARVVVADT ARALVREGRW
AGASLLES
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