| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3120 |
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| Symbol | |
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| ID | 7974330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3280801 |
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| End bp | 3281724 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793705 |
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| Product | Pirin domain protein |
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| Protein accession | YP_002945005 |
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| Protein GI | 239816095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.680161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA CCGCCGCACA GACCCAATTG CTTCAACCAC ACGACAAGGA CCTGGGCGGC
GGCTTCAATG TGCGGCGCCT GCTGCCCGCG GCGCAGCGCC GCTCGGTGGG CCCGTTCGTG
TTCTTCGACC ACTTCGGCCC GGCCACCGAG CAGCCCGGCA TGGCGCACGA CGTGCGGCCG
CATCCGCACA TCGGCCTGTC CACGGTCACC TATCTTTTCG AGGGCGCGAT GATGCATCGC
GACAGCCTCG GCAGCGTGCA GGAGATCCTG CCCGGCGCGA TCAACTGGAT GACCGCGGGG
CGCGGCATCG TGCACTCCGA GCGCAAGCCC GAGCGCCTCA AGGCCGACAC CTACGTGAAC
CACGGGCTGC AGCTCTGGGC TGCCTTGCCG CAGGCGCACG AAGAAATCGA GCCGAGCTTC
GAGCACACGC CGGCCGGTGG CATTCCGCAG GTGGTGGAGC AGGGCGTGGC GGTGCGCGTG
CTGGTGGGCG AGGCCTTTGG CCAACGCTCG CCGGTCAAGA CGCTGTCGCA GACGATCTAC
CTCGACATCG CATTGCCCGC GGGCGGCCGC TTCGAGCTGC CCGCGCTGGC GCCCGAATTG
GCGGTGTATG CCGTCGATGC CGATGTGCGC GTCAATGGCG AAGCGATCCC CGCGCACACG
ATGGCTGTTC TGCCCGACGG CCAGGGCGCA GTGCTGGCTT GCGACACCGC GGCGCGCCTG
ATGGTGATCG GCGGCGAGCC GCTCGACGGC CCGCGCTACA TCACCTGGAA TTTCGTATCG
AGCCGGCGCG AGCGCATCCT CGAAGCCGGC TCCGACTGGG CTGCGCAGCG CATGGGACAT
GTGCCTGGCG AGACCGAGTT CATTCCGCTG CCCGGCAAGC CCTTTGGCGT GCGCGAACCC
GACGTGGGCA CCACGCCGGT CTGA
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| Protein sequence | MTDTAAQTQL LQPHDKDLGG GFNVRRLLPA AQRRSVGPFV FFDHFGPATE QPGMAHDVRP
HPHIGLSTVT YLFEGAMMHR DSLGSVQEIL PGAINWMTAG RGIVHSERKP ERLKADTYVN
HGLQLWAALP QAHEEIEPSF EHTPAGGIPQ VVEQGVAVRV LVGEAFGQRS PVKTLSQTIY
LDIALPAGGR FELPALAPEL AVYAVDADVR VNGEAIPAHT MAVLPDGQGA VLACDTAARL
MVIGGEPLDG PRYITWNFVS SRRERILEAG SDWAAQRMGH VPGETEFIPL PGKPFGVREP
DVGTTPV
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