| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3114 |
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| Symbol | |
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| ID | 7974324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3273787 |
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| End bp | 3274245 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644793699 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_002944999 |
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| Protein GI | 239816089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.144854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTACG CGTTTCCGAT CCGCGTCTAC TGGGAAGACA CCGACGCCGG CGGCATCGTG
TTCTACGCCA ACTACCTCAA GTTCATGGAG CGCGGCCGCA CCGAATGGCT GCGCTCGCTG
GGCATCGAGC AGCGAAAGCT GCGCGAGGAA ACCGGCGGCC AGTTCGTGGT GAGCGAAACG
CAGCTCAAAT ACCATCGCCC CTCCCGGCTC GACGACGAAC TGCTGGTTAC AGCCGATCTC
CAACAAATGG GCACGGCGTC GTTGATAATC GGTCAACAGG TGCTATCAAA AACAGAGCAA
GAACGAACGG GAGCCGCGGC ACCCGTCCTG CTGTGCGAAG GCACGATACG CATCGGCTGG
GTGGATGCCT CCACATTGCG TCCTGCGCGC ATACCAGCCC AAGTTGCGGG AACCCTCGAG
CGCTGCGGCG GCTCCATGAC TCAACCTTTC AAGCCATGA
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| Protein sequence | MSYAFPIRVY WEDTDAGGIV FYANYLKFME RGRTEWLRSL GIEQRKLREE TGGQFVVSET
QLKYHRPSRL DDELLVTADL QQMGTASLII GQQVLSKTEQ ERTGAAAPVL LCEGTIRIGW
VDASTLRPAR IPAQVAGTLE RCGGSMTQPF KP
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