| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3113 |
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| Symbol | |
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| ID | 7974323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3272594 |
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| End bp | 3273790 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793698 |
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| Product | aminotransferase |
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| Protein accession | YP_002944998 |
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| Protein GI | 239816088 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAATTT CGGCGCGCGC ACAGCGCATC GAACCCTTCT ACGTGATGGA GGTGGCCAAG
GCCGCCGGCG TGCTCGCCCG CGAGGTGGCC CACACCGACC GGCCGATGAT CTTCCTGAAC
ATCGGCGAGC CCGACTTCAC CGCCCCGCCG CTGGTGCAGG AAGCCGCCGC CCGCGCCGTG
CGTGCCGGCG CCACGCAGTA CACCCAGGCC ACCGGCCTGG AGCTGCTGCG CGAGCGCATC
AGCGGCTGGT ACGCGCAGCG CTTCGGCGTC GATGTGCCGG CCCGCCGCAT CGTGGTGACC
GCGGGGGCTT CGGCTGCGCT GCAGCTGGCC TGCCTGGCGC TGATCGAATC CGGCGACGAG
ATCCTTCTGC CCGACCCCAG CTATCCCTGC AACCGCCACT TCGTGAGCGC CGCGGACGGC
AAGGCCGTGC TGGTGCCGAC CACGGCCGAA GAGCGCTTCC AGCTCACGGC CGCCAAGGTC
GAGGCCGCCT GGACCGAGAA GACGCGCGGC GTGCTCCTCG CCTCGCCCTC CAACCCGACC
GGCACCTCGA TCGCGCCCGA TGAACTGCGC CGCATCCACG AGGTGGTGTC GCAGCGCGGC
GGCATCACGC TGATCGACGA GATCTACCTG GGCCTTTCGC ACGACGATGC CTTCGGGCAG
ACGGCATTGG CCATCGACGA CAACGTCATC AGCATCAACA GCTTCAGCAA GTACTTCAAC
ATGACCGGCT GGCGCCTGGG CTGGCTGGTG GTGCCCGAGG CGCTGGTGCC GGTGGTCGAG
CGGCTGGCGC AGAACCTCTT CATCTGCGCG AGCACCGTGT CGCAGTACGC CGCGCTCGCC
TGCTTCGAGG CCGAGAGCAT TGCCGAATAC GAGCGCCGCC GCGCCGAGTT CAAGGCGCGC
CGCGACTGGT TCATTCCGCA GTTGAATGCG CTGGGCCTGA CCGTGCCGGT GGTGCCCGAT
GGCGCCTTCT ACGCCTGGGC CGACTGCACC GCGGTCGCCG AGAAGCTGGG CATCTCGGGC
AGCTGGGATT TCGCCTTCGA AACCATGAAG CGCGCCCACG TGGCCGTGAC GCCGGGCCGC
GATTTCGGCA CGGCCGAGAC CAGCCGGTTC GTGCGCTTCT CCACCGCCAG CTCGATGGCG
CACCTGCAGG AATCGGTCGA GCGCCTGCGC GCGATGATCG CGAACCCCGC CCGATGA
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| Protein sequence | MRISARAQRI EPFYVMEVAK AAGVLAREVA HTDRPMIFLN IGEPDFTAPP LVQEAAARAV
RAGATQYTQA TGLELLRERI SGWYAQRFGV DVPARRIVVT AGASAALQLA CLALIESGDE
ILLPDPSYPC NRHFVSAADG KAVLVPTTAE ERFQLTAAKV EAAWTEKTRG VLLASPSNPT
GTSIAPDELR RIHEVVSQRG GITLIDEIYL GLSHDDAFGQ TALAIDDNVI SINSFSKYFN
MTGWRLGWLV VPEALVPVVE RLAQNLFICA STVSQYAALA CFEAESIAEY ERRRAEFKAR
RDWFIPQLNA LGLTVPVVPD GAFYAWADCT AVAEKLGISG SWDFAFETMK RAHVAVTPGR
DFGTAETSRF VRFSTASSMA HLQESVERLR AMIANPAR
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