| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3095 |
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| Symbol | |
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| ID | 7974305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3250853 |
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| End bp | 3251644 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793680 |
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| Product | protein of unknown function DUF980 |
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| Protein accession | YP_002944980 |
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| Protein GI | 239816070 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.607966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGT GGCTGCGCCG GCTGCGCGCC CTTCCCTCCA TTCCTGAAGA CGCCTGGCAG
GCCACGCTCG AGCGCTATGC CTTTCTTGGC GCATTGCCCG CCGCCGCCCA GCAGCGGCTG
CGCACCCTGG CGGCCGAATT TCTGCGCGAC AAGGAGTTCC ACGGCACCCA GGGCTTCGTC
ATCACCGACG AGGTCGCACT GGCCATCGCC GCACAGGCGG TGCTGCCGAT CCTCAACCTG
AAGGGCGGGC TGGACTGGTA CGACGATTTC GTCGGTATCG TGGTGCATCC GTCGGAGGTC
GTCGCGCGGC GCAAGATCGT CGACGAGGCG CAGGTGGTGC ACGAATACGA CGAAGTGGTG
GCCGGCGAGG CCATGGACCG CGGGCCGGTG ATGCTGAGCT GGCAGGACGT GCTCGCGAGC
GGCATCACGA CCGGCGGCGG CTACAACGTC GTGATCCACG AATTCGCCCA CAAGATCGAC
ATGCGCGCAG GCGACGCCGA CGGCTGCCCG CCGCTGCCGC CCGGCTTTGC GGGCAAGCGC
AGCGCACGCG AGGCCCGCGC CGCCTGGCTC GCGGTGCTGC AGCCGGCGTA CGAGGACTTC
CGCGAGAAAA CCATCCTGGC CGAGCGCTTC GGCGCGGAGC CGCCATGGCT CGACGACTAC
GGGGCGGTGT CGATCAGCGA ATTCTTCGCG GTGGCCTGCG AGGCCTACTT CGTGAACCGC
ACGGCCTTTG CGCGGGATTT TCCGTCGGTG CTCGCGCTCT TCGACGAATT CTTCGGACGC
GGCCAGGCCT GA
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| Protein sequence | MFKWLRRLRA LPSIPEDAWQ ATLERYAFLG ALPAAAQQRL RTLAAEFLRD KEFHGTQGFV
ITDEVALAIA AQAVLPILNL KGGLDWYDDF VGIVVHPSEV VARRKIVDEA QVVHEYDEVV
AGEAMDRGPV MLSWQDVLAS GITTGGGYNV VIHEFAHKID MRAGDADGCP PLPPGFAGKR
SAREARAAWL AVLQPAYEDF REKTILAERF GAEPPWLDDY GAVSISEFFA VACEAYFVNR
TAFARDFPSV LALFDEFFGR GQA
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