Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3086 |
Symbol | |
ID | 7974296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3242639 |
End bp | 3243907 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644793671 |
Product | aspartate kinase |
Protein accession | YP_002944971 |
Protein GI | 239816061 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTGA TCGTTCACAA ATACGGCGGT ACGTCGATGG GCTCGACCGA GCGCATCAAG AATGTCGCCA AGCGCGTCGC CAAGTGGGCG CGCGCCGGCC ACCAGATGAT CGTGGTCCCG AGTGCCATGA GCGGCGAGAC CAATCGCCTG CTCGGCCTGG CCAAGGAACT GGCGCCGAGC AAACCGAGCG ACGCCCACGG GCGCGAGCTC GACATGCTCG CCTCGACCGG CGAACAGGCG TCGTCCGCGC TGCTGGCCAT TGCGCTGCAG GCCGAGGGCA TGCAAGCCGT GAGCTACGCG GGCTGGCAGG TGTCGGTGCG CACCGACAAC TCCTACACCA AGGCGCGCAT CGAGAGCATC GACGACGAGC GCGTGCGCGC CGACCTGGAC GCCGGCAAGG TGGTGGTCAT CACCGGCTTC CAGGGCGTGG ACGACAGCGG CAACATCACC ACGCTGGGCC GCGGCGGCAG CGACACCTCG GCCGTGGCCA TTGCGGCCGC GATGAAGGCG CACGAGTGCC TGATCTACAC CGACGTCGAC GGCGTCTACA CCACCGATCC GCGCGTGGAG CCCGATGCGC GCCGCCTCTC GACCGTGAGC TTCGAAGAGA TGCTCGAGAT GGCGAGCCTG GGCTCCAAGG TGCTGCAGAT CCGCTCGGTG GAATTCGCCG GCAAGTACAA GGTGCCGCTG CGTGTGCTTT CGAGCTTCAC GCCGTGGGAC ATCGACATCA ATGAAGAGGC CAAGTCCGGC ACGCTGATCA CTTTCGAGGA AGACGAAAAC ATGGAACAAG CCGTCGTATC CGGCATCGCT TTCAACCGCG ACGAAGCCAA GATCTCGGTG CTCGGCGTGC CCGACAAGCC GGGCATCGCG TATCACATCC TCGGTGCCGT GGCAGACGCC AACATCGAAG TCGACGTGAT CATCCAGAAC CTCAGCAAGG ACGGCCGGAC CGACTTCAGC TTCACGGTGC ACCGCAACGA ATATGCGAAG ACGGTCGACC TGCTGCAGTC GAAGGTCATG CCCTCGCTCG GCGCGACCGA GATCGTGGGC GACACCAAGA TCTGCAAGGT CAGCATCGTG GGCATCGGCA TGCGCAGCCA CGTGGGTGTT GCCAGCAAGA TGTTCCGCGT GCTGAGCGAA GAGGGCATCA ACATCCAGAT GATTTCCACC AGCGAGATCA AGACCTCGGT CGTGATCGAC GAAAAATACA TGGAATTGGC CGTGCGCGCG CTGCACAAAG CCTTCGACCT GGACCAACCG GCCGCCTGA
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Protein sequence | MALIVHKYGG TSMGSTERIK NVAKRVAKWA RAGHQMIVVP SAMSGETNRL LGLAKELAPS KPSDAHGREL DMLASTGEQA SSALLAIALQ AEGMQAVSYA GWQVSVRTDN SYTKARIESI DDERVRADLD AGKVVVITGF QGVDDSGNIT TLGRGGSDTS AVAIAAAMKA HECLIYTDVD GVYTTDPRVE PDARRLSTVS FEEMLEMASL GSKVLQIRSV EFAGKYKVPL RVLSSFTPWD IDINEEAKSG TLITFEEDEN MEQAVVSGIA FNRDEAKISV LGVPDKPGIA YHILGAVADA NIEVDVIIQN LSKDGRTDFS FTVHRNEYAK TVDLLQSKVM PSLGATEIVG DTKICKVSIV GIGMRSHVGV ASKMFRVLSE EGINIQMIST SEIKTSVVID EKYMELAVRA LHKAFDLDQP AA
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