| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3081 |
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| Symbol | |
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| ID | 7974290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3237150 |
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| End bp | 3238103 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793665 |
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| Product | alpha-L-glutamate ligase, RimK family |
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| Protein accession | YP_002944966 |
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| Protein GI | 239816056 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATCG TCATCATGAC GGACGAGATC GGCTGGCACA CGCGCCAGCT GCAGGCCGCG
CTGCGCGCAC GCGGCGCGGT GGGGCGCTGC GTCGACCTGG CCGACTGCAA CATCGACACC
ACTGCCGCAT GGCATGGCCT GGTCATTCCC GGCTATGGCC GCGAGCTGCC CGATGCAGTG
CTGGTGCGCG GCATTGCCGG CGGAAGCTTC GAGCAGGTCA CCAAGCGCCT GGGCGTGCTG
CATGCCTTGC GCGAACTGGG CGTGCCGGTC TACAACGACG CGCGCGCCAT CGAGCGCACG
GTCGACAAGT CGATGACCAG CCTGCTGCTG CATGCCGCGC GCATTCCCGC GCCTGCCACC
TGGGCCACCG AATCGGCGGC GCAGGCGCGG CGCATCGCGA TGCGCGAAAT GGCCGCGGGC
CATGCACTGG TGCTCAAGCC CTTGTTCGGT TCGCAGGGCA AGAACCTGCA ACTGGTGAGA
GAGGTCGACG GCGTCCATCA TCCGATGCCC GACATCGATG CGCGCTACGC GGGCCTGGCC
TATCTGCAGC GCTTCGTGCC GCCCATGGGT TCGCCGGGCT TCGACTGGCG CGTGATGGTG
GTGGGCGGAC GCGCCGTCAC CGCGATGCGG CGCGTCAGCA TGCACTGGAT CCACAACGTG
GCCCAGGGCG CGCGCTGCGA GCCGGCCGTG CTGGAGCCCG CGCTCGCGCA ACTGGCCGAA
GGCGCGGCGC AGGCGCTGGA CATGGACTAC GCGGGCGTGG ACCTCATCGC GGCGGCCAGC
GGGCCGAAGA TCCAGGTGCT CGAGGTCAAT GGCGTGGCCG CCTGGCAGGG GCTGCAGCGC
GTGACGGGCT TCAACATTGC GCGCGCCATC GTCGACGACC TGCTCGACCG CAAGCTCGCG
CAGGCGCGCC GCCTCGTGCA GCAGAACCTG CCGCCGCCGG AGCGCCGCGC CTGA
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| Protein sequence | MRIVIMTDEI GWHTRQLQAA LRARGAVGRC VDLADCNIDT TAAWHGLVIP GYGRELPDAV
LVRGIAGGSF EQVTKRLGVL HALRELGVPV YNDARAIERT VDKSMTSLLL HAARIPAPAT
WATESAAQAR RIAMREMAAG HALVLKPLFG SQGKNLQLVR EVDGVHHPMP DIDARYAGLA
YLQRFVPPMG SPGFDWRVMV VGGRAVTAMR RVSMHWIHNV AQGARCEPAV LEPALAQLAE
GAAQALDMDY AGVDLIAAAS GPKIQVLEVN GVAAWQGLQR VTGFNIARAI VDDLLDRKLA
QARRLVQQNL PPPERRA
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