| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3066 |
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| Symbol | |
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| ID | 7973786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3222717 |
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| End bp | 3224402 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793650 |
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| Product | formylmethanofuran dehydrogenase subunit A |
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| Protein accession | YP_002944951 |
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| Protein GI | 239816041 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1229] Formylmethanofuran dehydrogenase subunit A |
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| TIGRFAM ID | [TIGR03121] formylmethanofuran dehydrogenase subunit A |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGA CACTGCGCCT GCGCGGCGGC CGCGTCATCG ATCCCGCGAA CGGCCGCGAC
GAGGTGCGCG ACCTGTACGT GCGCGATGGC CGCATGGTCG AGCTCGCGCC GAACGAAGCC
GCCACCGAGG AGATCGACAT CGGCGGCTGC ATCGTGATGG CCGGCGGCAT CGACATGCAC
ACCCACATCG GCGGCGGCAA GGTCAACCTC GCGCGCATGC TGCTGCCCGA AGACCACCGC
GCCAACGCGA ACCCCATTGC GCTGCCCGAC AACGTGCTCG AGCTGGCCTC GTGCGGCACC
TGCACGCCGG GCACGCTGGC CACCGGCTAC CGCTATGTCG AGATGGGCTA CACGGCGGCC
TTCGAGCCGG CCATGATGGC CTGCAACGCG CGCCACGCGC ACATGGAGAT GGGCGACACG
CCGATCCTCG ACCACGGCGC CTACGTGATG CTCGGCAACG ACGAGCTGTT CTTGCGCATG
CTGGCCGAGG GCTGGGACTT CGAGCGTATC CGCGACTACG CGGGCTGGAC CATCAACGCC
AGCAAGGCGA TGGGCGTGAA GGTGGTGAAC CCGGGCGGCA TCTCGGCCTT CAAGTTCAAC
CAGCGCAAGC TCGACGTCGA CGAGAACCAC GTGCACTGGC AGGTCACGCC GCGGCAGGTG
GTGCACACGC TGGCGCGCGC GCTGCGCGAG CTTGGCGTGC CGCATCCGCT GCACATCCAC
GGCAGCAACC TGGGCGTGGC CGGCAACATC CAGTCCACGC TCGACACCAT CGCCGCGCTC
GATGGCCTGC CCGGGCACCT GACGCACATC CAGTTCCACG CCTATGGCAC CGAGGGGCCG
AAGAAATTCT CCTCGGCCGC GCTGCAGCTC GCGGAGGTGG TGAACGCCAA CAAGAACGTC
AGCATCGACG TCGGCCAGAT CATGTTCGGC CAGACCGTCA CCGCCTCGGG CGACACCATG
CGCCAGCATG CGCAGTCGGG CCTGGCCGAT CCGCGCAAGT GGATCGGCGC CGACATCGAG
TGCGAGGCCG GCTGCGGCGT GGTGCCGTTC CGCTACCGCG AGCAGAGCTA CGTGAATGCG
CTGCAGTGGG TCATCGGGCT GGAGATCTTC CTGCTGGTCG ACGATCCGTG GCGCGTGGTG
CTGACTACCG ACCACCCCAA CGGCGGCCCG TTCACGAGCT ATCCGCACCT GATCCGCCTG
TTGATGGACC GCAGCTTCCG CGAGGAGCAG CTTGCCAAGC TGCATCCCGA AGTGGCGGCG
CAGGCCGCGC TGCGCTCGAT CACGCGCGAG CTCTCGCTGT ATGAGATCGC GATCATGACC
CGCGCCGGCC CCGCGCGGCT GCTGGGCCTG CGCGACCGCG GCCATCTGGG CGCGGGCGCC
GCGGCCGACA TTGCGGTGTA CCGCGAGAAC GCCGACCGCG AGGCCATGTT CGCGACGCCC
GAATACGTGT TCAAGGACGG CGTGCTGGTC TCGCGCGCGG GCCGCGTCAC GGCGGCGCCG
GTGGGCGGCA CGCACTTCGT CGCGCCGGAC TACGACCGCG GCATCGAGAA GCGGCTGCGC
CGGCATCTTG CGGCGCAGGG TTCGGTCAAC TTCGACCACA TCGCCATCGG CCACGACGAG
CTGTGCCAAT GCTGCAACGG CGGGCGCCTG CTGCCGGCCG AGTGCTTCAA GGAGTCGTCG
TCGTGA
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| Protein sequence | MTATLRLRGG RVIDPANGRD EVRDLYVRDG RMVELAPNEA ATEEIDIGGC IVMAGGIDMH
THIGGGKVNL ARMLLPEDHR ANANPIALPD NVLELASCGT CTPGTLATGY RYVEMGYTAA
FEPAMMACNA RHAHMEMGDT PILDHGAYVM LGNDELFLRM LAEGWDFERI RDYAGWTINA
SKAMGVKVVN PGGISAFKFN QRKLDVDENH VHWQVTPRQV VHTLARALRE LGVPHPLHIH
GSNLGVAGNI QSTLDTIAAL DGLPGHLTHI QFHAYGTEGP KKFSSAALQL AEVVNANKNV
SIDVGQIMFG QTVTASGDTM RQHAQSGLAD PRKWIGADIE CEAGCGVVPF RYREQSYVNA
LQWVIGLEIF LLVDDPWRVV LTTDHPNGGP FTSYPHLIRL LMDRSFREEQ LAKLHPEVAA
QAALRSITRE LSLYEIAIMT RAGPARLLGL RDRGHLGAGA AADIAVYREN ADREAMFATP
EYVFKDGVLV SRAGRVTAAP VGGTHFVAPD YDRGIEKRLR RHLAAQGSVN FDHIAIGHDE
LCQCCNGGRL LPAECFKESS S
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