Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3053 |
Symbol | |
ID | 7973773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3211271 |
End bp | 3212428 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644793637 |
Product | pyrroloquinoline quinone biosynthesis protein PqqE |
Protein accession | YP_002944938 |
Protein GI | 239816028 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCG CCGCGCCGCC GCGCCCCGGA CCGCCGCTGT GGCTGCTGGC CGAGCTGACC TACCGCTGCC CGCTGCATTG CGTGTTCTGC TTCAACCCGG TCGACTTCGC GCAGCAGGAG AACGAACTGG GCACCGAGGA CTGGCTGCGC GTGCTGCGCG AAGGCCGCGA GCTCGGCGCG GTGCAGTGCG GCCTCTCGGG CGGCGAGCCG CTGCTGCGCG ACGACCTCGA GATCATCATT GCCGAGGCCG CGCGCCTGGG CTACTACACC AACCTGCTGA CCTCGGGCGT GGGCCTCACG GCGCAGCGCG CCGCCGCGCT CAAGGCCGCG GGCCTGGACC ACGTGCAGCT GTCGTTCCAG GACTCGACGC GCGAGATGAA CGACTTCCTC TCGCACACCA AGACCTTCGA GCTCAAGAAC CGGGTGGCGA AGATCATCAA GGACCAGGGC TGGCCGATGG TGCTGAACGT GGTGATCCAC CGCATGAACA TCGACCACAT CGACCGCATC ATCGAGATGG CGCACGAGAT GGGGGCCGAG TACCTCGAGC TTGCCAACAC CCAGTACTAT TCCTGGGCCT TCGTCAACCG CGACCAGCTG CTGCCCACGC ACGAGCAACT GCGCCATGCG GAGGAGGTGA CCGATGCCTG GCGCAAGCGG CTCGGCGAGC GCATGCGCAT CTTCTTTGTG GCGCCCGACT ACCACGAGGG CAAGGCCAAG AAATGCGTGA ACGGCTGGGG CAGCATGTTC CTCACCGTGG CGCCCGACGG CACCGCGCTG CCTTGCCACA CGGCCAAGAT GCTGCCGGGC CTCGAATTCC CGAACGTGAA GGCGCACAGC CTGCGGGAGA TCTGGTTCGA TTCGGAAGGC TTCAACCGCT ACCGCGGCAC CGGCTGGATG AAGGAGCCCT GCGCGAGCTG CGACCAGCGC GAGCAGGACC TGGGCGGCTG CCGCTGCCAG TCCTACCTGC TGGCGCAGGA CGCGGCCGCG GCCGATCCGG TGTGCGCGAA GAGCCCGGAC CACCACCGCG TGGTCGAGGC GGTGGAGCGT GCGGCCGCGC GCGACCCGGC GGCGCCGACG GAGCATCCGC TGGTGTTCCG CGATCCCGCC AATTCGCGGC GGCTTTCCTC CGTGGCGCTC GTCACGCCGG ACGCGTGA
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Protein sequence | MTTAAPPRPG PPLWLLAELT YRCPLHCVFC FNPVDFAQQE NELGTEDWLR VLREGRELGA VQCGLSGGEP LLRDDLEIII AEAARLGYYT NLLTSGVGLT AQRAAALKAA GLDHVQLSFQ DSTREMNDFL SHTKTFELKN RVAKIIKDQG WPMVLNVVIH RMNIDHIDRI IEMAHEMGAE YLELANTQYY SWAFVNRDQL LPTHEQLRHA EEVTDAWRKR LGERMRIFFV APDYHEGKAK KCVNGWGSMF LTVAPDGTAL PCHTAKMLPG LEFPNVKAHS LREIWFDSEG FNRYRGTGWM KEPCASCDQR EQDLGGCRCQ SYLLAQDAAA ADPVCAKSPD HHRVVEAVER AAARDPAAPT EHPLVFRDPA NSRRLSSVAL VTPDA
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