| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3044 |
|---|
| Symbol | |
|---|
| ID | 7973764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 3203945 |
|---|
| End bp | 3204271 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644793628 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002944929 |
|---|
| Protein GI | 239816019 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.274335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGC ATGGCGCGAC GCATGCCAAC GACTTTCCCA CACTGGACCG CGTGCTGTAC
GTGCAGGAAT GCATCGCGGC CCACCCCGAT GCGGGCCACT TCGAAATGGC CAGCAAGTGC
TCCTGCGCGG TCGACGCGCT GGCCAGGGAA ATCAAATACT CGGAATACGT GGACCTGAGC
ACCGCGGCCA AGGCCACCAC CATCGGCGGC GAGCGCGGCG GCTACATCCG CGATTCGGAA
AAGCTGCAGG CCGACATCAA GCGCTACAAG GCGCTGCAGG CCAAGGCCAA CAAGGGCTGC
TTCATCGGCC CGCCGACCGC GCGCTGA
|
|---|
| Protein sequence | MAVHGATHAN DFPTLDRVLY VQECIAAHPD AGHFEMASKC SCAVDALARE IKYSEYVDLS
TAAKATTIGG ERGGYIRDSE KLQADIKRYK ALQAKANKGC FIGPPTAR
|
|---|
| |