| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3035 |
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| Symbol | |
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| ID | 7973755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3194583 |
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| End bp | 3195599 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793619 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944920 |
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| Protein GI | 239816010 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.208714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGA GGCGGGCCAC CACGCATGGG CAGGGCGGTT TCACCCGGCG CGGCTTGCTG
CGCGGCGCCG GCGCGCTGGC GCTGGGCGCG TTGCCCTTGG CCCGGGCGAT GGCCTCGACC
GAGCCCTTTC CTTCGCGGCC CGTCACGCTG TGGGTGCCCT GGCCCGCGGG CGGCGCCACC
GACATCTCGC TGCGGATCCT GGCCGAGCTG GCCTCGGTGC CGCTCGGGCA GCCGGTGCTG
ACCGAAAACC GCGGCGGCGC CGGCGGCACG CTGGCCATGC CGGTGCTGCA GCAGGCGCGG
CCCGACGGCT ACACCATCGC GCAGATGCCG CAGCCGGTGT TCCGCGCGCC GCACACGCAG
AAGGTGCTGT GGGATCCGAT CCGCGACGTG ACGCCGATCA TCCAGGTGTC CAGCGTCACC
TTCGGCATGC TGGTCGCGGC GGGCAGCCCG ATGCGCTCGC TCGAGGACAT GTTCGCGTTC
GCACGCGCCC GGCCCGGCGA GCTGACCATT GCGACCAACG GCATCGGCAC CACGCCGCAC
ATGGTGCTGG AGACGCTGTT CACGGCGCGC GGCCTGCGCT ACATCCATGT GCCGTACAAG
GGCACGTCCG AGCAGCTCAA CGCGATTGCG GGCGGGCAGG TGATGGCCGG CGTCAATTCC
ACCGGCTTCG GGCCGGCCGT CGATGCCGGC ACGCTGCGGC TGCTGGCGAT CTTTTCGGGC
GAGCGTTCGA AGCGCTGGCC ACAGGTGCCC GTGCTGCGCG AGCTCGGCTT CGACATCGTG
GCCAAGTCGC CCTACGGGCT GGCCGGGCCG CGCGGCCTGC CGCGCGGCGT GGTGGCGGTG
CTGCACGACG CCTTCAAGAA AGCCATGTTC GACCCGCGCT TCAAGGACGA GCTCGCCAAG
TACGACCAGG AGGCCGACTA CCTCGGCCCG GAGGCCTACG CGCAGTCGTG CCGCGAAATC
TTCGCGCAGG AGCGCGCCAT CGTCGAAAAG CTGGGCCTCG CGCGCACCGG CACTTGA
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| Protein sequence | MSRRRATTHG QGGFTRRGLL RGAGALALGA LPLARAMAST EPFPSRPVTL WVPWPAGGAT
DISLRILAEL ASVPLGQPVL TENRGGAGGT LAMPVLQQAR PDGYTIAQMP QPVFRAPHTQ
KVLWDPIRDV TPIIQVSSVT FGMLVAAGSP MRSLEDMFAF ARARPGELTI ATNGIGTTPH
MVLETLFTAR GLRYIHVPYK GTSEQLNAIA GGQVMAGVNS TGFGPAVDAG TLRLLAIFSG
ERSKRWPQVP VLRELGFDIV AKSPYGLAGP RGLPRGVVAV LHDAFKKAMF DPRFKDELAK
YDQEADYLGP EAYAQSCREI FAQERAIVEK LGLARTGT
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