| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3032 |
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| Symbol | rbcL |
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| ID | 7973752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3189692 |
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| End bp | 3191158 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793616 |
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| Product | ribulose bisophosphate carboxylase |
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| Protein accession | YP_002944917 |
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| Protein GI | 239816007 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0135333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAACA TGAACGAAGC AATCCAGATC ACCGACGCCA AGAAGCGCTA CTCGGCCGGT
GTGCTCAAGT ACGCGCAGAT GGGCTACTGG GACGGCGACT ACGTGCCCAA GGACACGGAC
ATCCTCGCGC TCTTCCGCAT CACGCCGCAG GAAGGCGTGG ACGCCATCGA GGCCGCCGCG
GCCGTGGCCG GCGAATCGTC CACCGCCACC TGGACGGTGG TGTGGACCGA CCGCCTCACG
GCCTGCGACA TGTACCGCGC CAAGGCCTAC AAGGTGGAGC CGGTGCCCAA CAATCCGGGC
CAGTATTTCT GCTACGTGGC CTACGACCTC TCGCTGTTCG AGGAAGGCTC GATCACCAAC
GTGACGGCTT CCATCATCGG CAACGTCTTC AGCTTCAAGC CGCTGAAGGC CGCGCGGCTG
GAGGACATGA AGTTCCCGGT GGCCTACGTC AAGACCTTCC CGGGCCCGCC GACCGGCATC
GTGGTGGAGC GCGAGCGGCT CGACAAGTTC GGCCGGCCGC TGCTGGGCGC CACCACCAAG
CCCAAGCTCG GGCTCTCGGG CCGCAACTAC GGCCGCGTGG TGTACGAAGG CCTGCGCGGC
GGGCTCGACT TCATGAAGGA CGACGAGAAC ATCAACTCGC AGCCCTTCAT GCACTGGCGC
GACCGCTTCC TGTTCGTGAT GGACGCCGTC AACAAGGCCA GCGCCGCCAC CGGCGAGGTC
AAGGGCAGCT ACCTGAACGT CACGGCCGGC ACCATGGAAG AGATGTACCG CCGCGCGCAG
TTCGCCAAGG AGCTGGGCTC GGTGATCGTG ATGGTCGACC TCGTGATCGG CTACACGGCC
ATCCAGTCGA TGAGCAACTG GTGCCGCCAG AACGACATGA TCCTGCACCT GCACCGCGCG
GGCCACGGCA CCTACACGCG CCAGAAGAAC CACGGTGTGA GCTTCCGGGT GATCGCCAAG
TGGATGCGCC TGGCGGGCGT GGACCACATC CATGCGGGCA CGGCCGTGGG CAAGCTCGAG
GGCGACCCGA TGACGGTGCA GGGCTACTAC AACGTGTGCC GCGACACGCA CACCAAGGTC
GACCTGCCGC GCGGCATCTA CTTCGACCAG GACTGGGGCG CGCTGCGCAA GGTGATGCCG
GTGGCCTCGG GCGGCATCCA TGCGGGCCAG ATGCACCAGC TGCTCGACCT GTTCGGCGAC
GACGTGGTGC TGCAGTTCGG CGGCGGCACC ATCGGCCACC CGCAGGGCAT CCAGGCCGGG
GCCACGGCCA ACCGCGTGGC GCTCGAAGCC ATGGTGCTGG CGCGCAACGA AGGCCGCGAC
ATCGCCAACG AGGGGCCGCA GATCCTGCGC GACGCAGCCA AGTGGTGCAC GCCGCTCGCG
GCCGCGCTCG ACACCTGGGG CGAGATCTCC TTCAACTACG CCTCCACCGA TACCTCGGAC
TACGTGCCGA CGCCGTCGGT GGCCTGA
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| Protein sequence | MGNMNEAIQI TDAKKRYSAG VLKYAQMGYW DGDYVPKDTD ILALFRITPQ EGVDAIEAAA
AVAGESSTAT WTVVWTDRLT ACDMYRAKAY KVEPVPNNPG QYFCYVAYDL SLFEEGSITN
VTASIIGNVF SFKPLKAARL EDMKFPVAYV KTFPGPPTGI VVERERLDKF GRPLLGATTK
PKLGLSGRNY GRVVYEGLRG GLDFMKDDEN INSQPFMHWR DRFLFVMDAV NKASAATGEV
KGSYLNVTAG TMEEMYRRAQ FAKELGSVIV MVDLVIGYTA IQSMSNWCRQ NDMILHLHRA
GHGTYTRQKN HGVSFRVIAK WMRLAGVDHI HAGTAVGKLE GDPMTVQGYY NVCRDTHTKV
DLPRGIYFDQ DWGALRKVMP VASGGIHAGQ MHQLLDLFGD DVVLQFGGGT IGHPQGIQAG
ATANRVALEA MVLARNEGRD IANEGPQILR DAAKWCTPLA AALDTWGEIS FNYASTDTSD
YVPTPSVA
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