Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3026 |
Symbol | |
ID | 7973746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3184943 |
End bp | 3186019 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793610 |
Product | Inositol phosphatase/fructose-16-bisphosphatase |
Protein accession | YP_002944911 |
Protein GI | 239816001 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0158] Fructose-1,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00242569 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCATTG CAGGCAAGGC CACGCTGACC CAGTACATCA TCGAGGAGCG CCGCCGTCAC CCCGGTGCCA CGGGCGCGCT CAACGCGCTC ATCACCGACG TCTCCCTCGC CTGCAAGGCG ATCTCGCGCA AGGTGGCGCT CGGCGCGCTG GGCGACGTGC TCGGCAGCGC GAGCACACAG AACGTGCAGG GCGAGGAACA GAAGACGCTC GACGTGCTGA GCAACGACAT GTTCCTGCGC GCCAACGAGT GGGGCGGCCA CGTAGCGGGC ATGGTCTCGG AAGAGATGGA AGAGCCCTAC CTGCCGCCGC AGCAGCAGTA CCCGCGCGGC AAGTACCTGC TGCTGTTCGA TCCGCTCGAC GGTTCGTCGA ACATCGATGT CAACGTGGCG GTGGGCAGCA TCTTCTCGAT CCTGCGCGCG CCCACGCCAG AGGCCGACGC GAAGCCTGAA GACTTCTTGC AGCCCGGCAC CGAGCAGGTT GGCGCCGGCT ATGCGATCTA CGGCCCTTCG ACCATGCTGG TGCTGACGCT GGGCAACGGC ACGCACGCCT TCACGCTCGA TCCGCAGCTG GGCGAATGGG TGCTGAGCCA TCCGAACCTG AGCATTCCGC GGCAGACCAG CGAGTTCGCG ATCAACGCTT CGAACAGCCG CTTCTGGGAG CCGGCCGTGA AGCGCTACGT CGACGAATGC CTGGCCGGCA AGGAAGGCCC GCGCGGCATC GACTTCAACA TGCGGTGGAT CGCCTCGCTG GTGGCCGAGA CGCACCGCAT CCTGATGCGC GGCGGCGTCT TCATGTACCC GCGCGACAGC AAGGAAGCGG GCCGCGACGG GCGCCTGCGG CTGCTCTACG AGGCCAATCC GATCTCGTTT TTGATCGAAC AGGCCGGCGG CATGGCCAGC ACCGGCCGGC GCCGCCTGAT GGCGGTCGAG CCGGAGTCGA TCCACCAGCG CATCGGCTTC GTCTTCGGTT CGTCCGACGA GGTGGCGCGC GTGGAGGCCT ACCACAGCGA GGAGCCGCAG GACACCTACC AGGCGCCGCT GTTCGGCAAG CGCGGCCTGT TTGCGACCGC GGCCTGA
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Protein sequence | MPIAGKATLT QYIIEERRRH PGATGALNAL ITDVSLACKA ISRKVALGAL GDVLGSASTQ NVQGEEQKTL DVLSNDMFLR ANEWGGHVAG MVSEEMEEPY LPPQQQYPRG KYLLLFDPLD GSSNIDVNVA VGSIFSILRA PTPEADAKPE DFLQPGTEQV GAGYAIYGPS TMLVLTLGNG THAFTLDPQL GEWVLSHPNL SIPRQTSEFA INASNSRFWE PAVKRYVDEC LAGKEGPRGI DFNMRWIASL VAETHRILMR GGVFMYPRDS KEAGRDGRLR LLYEANPISF LIEQAGGMAS TGRRRLMAVE PESIHQRIGF VFGSSDEVAR VEAYHSEEPQ DTYQAPLFGK RGLFATAA
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