| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3018 |
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| Symbol | |
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| ID | 7973738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3174143 |
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| End bp | 3175702 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793602 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_002944903 |
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| Protein GI | 239815993 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA CCATCATCTA TGTCCCGCGC GACTCCGCGG CGCTGGCTGT CGGCGCCGAC
CGGGTGGCGC GGCAGATCGA AGCACAGGCC CGTGCGCGCA ACGCCGACGT GCGCATCGTG
CGCAACGGCT CGCGCGGCCT GTTCTGGCTG GAGCCGCTGG TCGAGGTGGC CACGCCGCAA
GGCCGTGTGG CCTACGGCCC GGTCACGGGT GCCGACGTTG CGGGCCTGTT CGAGGCCGGC
TTTCTTTCCG GCGGCGCCCA TGCGCTGAAC CTGGGCCTGA CCGAAGAGAT TGCGTACCTG
AAGAAGCAGG AGCGCCTGAC CTTCGCGCGC ATGGGCGTGA CCGACCCGGT GTCCGTGGCC
GACTACGAGG CGCACGAAGG CTTCGCGGGA CTGCGCCGCG CGCTCACCCT CGCACCGGCC
GAAATCGTGC AGCAGGTGCT CGACTCCGGA CTGCGCGGCC GCGGCGGCGC CGCATTCCCG
GCCGGCATCA AATGGAAGAC CGTGCTGGCC GCGGAGGCGC CGCAGAAATA CATCGTCTGC
AATGCCGACG AAGGCGACTC GGGCACCTTC TCGGACCGCA TGACGATGGA AGGCGATCCG
CTGATGCTGG TGGAAGGCAT GGCCATCGCG GGCATTGCAA CGGGCGCGAC CGAAGGCTAC
ATCTACGTTC GCTCGGAATA CCCGCATGCC ATTGCCACGC TGAACGAGGC AATCCGCCAT
GCGGAGCAGG CGGGCTTCCT GGGCGACGAC ATCCTGGGCT CGGGCCACGC CTTCCGCCTG
ACCGTGCGCA AGGCCGCGGG CGCCTACGTG TGCGGAGAGG AAACCGCGCT GCTCGAAAGC
CTGGAAGGCC GCCGCGGCAT CGTGCGCGCC AAGCCGCCGC TGCCGGCGCT GCAGGGCCTG
TTCGGCCAGC CGACCGTGAT CAACAACGTG ATCACGCTGG CGTCGGTGCC CCTCATCCTG
GCGCGCGGCG CGGACTTCTA CAAGCACTAC GGCATGGGCC GCTCGCGCGG CACGCTGCCG
TTCCAGCTGG CCGGCAACAT CCGGCACGGC GGCCTGGTCG AGAAGGCCTT CGGCCTGAGC
CTGCGCGAAC TGCTCTACGA CTTCGGCGGC GGCAGCGCGA GCGGCCGGCC GATCAAGGCG
GTGCAGGTGG GCGGTCCGCT GGGCGCCTAC GTGCCCGAAT CGCAGTGGGA CCTGCCGCTC
GACTACGAGG CCTATGCGGC CGTGGGCGCG GTGGTCGGGC ACGGCGGCAT CGTGGTGCAC
GACGACACGG CCGACATGTC GCAGCTGGCG CGCTACGCGA TGGAGTTCTG CGCGATCGAG
TCCTGCGGCA AGTGCACGCC CTGCCGCATC GGCTCCACGC GCGGCGTGGA AGTGATCGAC
AAGATCACGA GCAACCAGAA CCGGCCGCAG CAGGTCATCC TGCTGCGCGA CCTGTGCGAC
ACCATGCTGC ACGGTTCGCT CTGTGCGATG GGTGGCATGA CGCCCTACCC CGTGCTCTCG
GCCATCAATC ACTACCCGGA GGACTTCGGC ATCGAAGCCC CCGACCGCGC CGCAGCCTGA
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| Protein sequence | MTTTIIYVPR DSAALAVGAD RVARQIEAQA RARNADVRIV RNGSRGLFWL EPLVEVATPQ
GRVAYGPVTG ADVAGLFEAG FLSGGAHALN LGLTEEIAYL KKQERLTFAR MGVTDPVSVA
DYEAHEGFAG LRRALTLAPA EIVQQVLDSG LRGRGGAAFP AGIKWKTVLA AEAPQKYIVC
NADEGDSGTF SDRMTMEGDP LMLVEGMAIA GIATGATEGY IYVRSEYPHA IATLNEAIRH
AEQAGFLGDD ILGSGHAFRL TVRKAAGAYV CGEETALLES LEGRRGIVRA KPPLPALQGL
FGQPTVINNV ITLASVPLIL ARGADFYKHY GMGRSRGTLP FQLAGNIRHG GLVEKAFGLS
LRELLYDFGG GSASGRPIKA VQVGGPLGAY VPESQWDLPL DYEAYAAVGA VVGHGGIVVH
DDTADMSQLA RYAMEFCAIE SCGKCTPCRI GSTRGVEVID KITSNQNRPQ QVILLRDLCD
TMLHGSLCAM GGMTPYPVLS AINHYPEDFG IEAPDRAAA
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