| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3012 |
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| Symbol | |
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| ID | 7973732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3168900 |
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| End bp | 3170321 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793597 |
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| Product | histidine kinase |
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| Protein accession | YP_002944898 |
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| Protein GI | 239815988 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.250655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGGG CCTTGTCGCT GCGCGCGAGG CTGCTGCTGG GCATTCTCGC GCCGGTGGCG
CTGTTCATCG TGATCAACAG CGTGAGCCTG TACCGCCAGA GCCTGGCCGC GGCCACCACG
GCCTACGACC GCACGCTGCT CGCGTCGGCC AAGACCATCG GCGAGCAGCT CGACGTGGAA
GGCTACGACG AGAACGCGCG GCTGCGCGCC ATCGTGCCCT ATTCGGCGCT CGAGGCCTTC
GAGGCCGACA ACCGCAGCCG CCTTTTCTAT CGCGTCTCCG CGCTCGACGG CGAGATGGTC
TCGGGCTTTG CCGAGTTGCC GTTCTGGCGC GGCCGCATCC CCGACCGCGG GGCCTATGCG
GCACTGGTCG ACTTCTACGA CGCGCGCTTT CGCGACCAGC CGGTGCGCAT GGCGGTGTTG
CTGCAGCCCG TGGCCAGCGG CCGCGGCCGC GGCATGGCCG TGGTGCAGGT GGCCGAAACC
CTGGAGTTGC GCGAAACGCT GGTGCGCAAG CTGCTGGTCG ACATGCTGTG GCGCCAGCTG
CTGCTGATGG GCGTGATCGC GCTGGTGACC GTGCTGGTGG TGCAGCGCGC CACGCGGCCG
GTGCGCGAGC TCGGCGAAGC CATCGAGAAG CGCGCGGCCG ACGACCTTTC CCCGATCGAC
GCGCCCGACG CGCCGCGCGA ACTGCGCCCG CTGGTCGATG CCACCACCGA GGTCATGGGC
CGGCTGCAGC GCCTGCTCGA CCACCAGAAG CGCTTCGTGC GCGACAGCGC CCATCAGCTG
CGCACGCCGC TCGCAGTGCT CAAGGCGCAG GTGCAATCGG CGCGGCGCGG CGACGTGCCG
CCCGAGCAGG CGCTGGGCGA GATCAGCCAG ACCGTGGAGC GCGCCACCAC GCTGGCCAAC
CAGATGCTGT CGCTCGCCAA GGTCGAGCAG CTGCGCCAGC GGCCGGAATC GATGCCGCTG
GAGCTTGGCG AGGTGGTGCG CCAGATTGCG CTCGACCTGT CGCCGCTGAT CGCCGACAAG
GCGCTGGACT TCGAACTGGC CATCGACGGG CCCGTGACGG TGCGCGCGCA CCAATGGATG
CTGCAGGAGC TCACGCGCAA CCTGCTGCAC AACGCCATCA AGCAGAGCCC GCGCGGCGGC
GCCCTTTTGG TGATGGTGCG CTCGGACGGC CCGGAAGCCG TGCTGACGGT GCGCGACCAG
GGGCCCGGCA TTGCGGCCGA ACTGCGCCAG CGCCTGTTCG CGCCATTTTC CGCCGGCGAC
ACCGCCAGCG GCTCGGGGCT GGGCCTGGCC ATCTGCCGCG AGATCGTGCT CGCGCTCGGC
GGGCGCATCA GCCTCGACAA CCGCAGCGCG CAGGAAAATT CCGCACAGGT GATCGGCCTC
GATGCTGTCG TGCGGCTGCC TCTCTTCCAC CACAATGCCT GA
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| Protein sequence | MKRALSLRAR LLLGILAPVA LFIVINSVSL YRQSLAAATT AYDRTLLASA KTIGEQLDVE
GYDENARLRA IVPYSALEAF EADNRSRLFY RVSALDGEMV SGFAELPFWR GRIPDRGAYA
ALVDFYDARF RDQPVRMAVL LQPVASGRGR GMAVVQVAET LELRETLVRK LLVDMLWRQL
LLMGVIALVT VLVVQRATRP VRELGEAIEK RAADDLSPID APDAPRELRP LVDATTEVMG
RLQRLLDHQK RFVRDSAHQL RTPLAVLKAQ VQSARRGDVP PEQALGEISQ TVERATTLAN
QMLSLAKVEQ LRQRPESMPL ELGEVVRQIA LDLSPLIADK ALDFELAIDG PVTVRAHQWM
LQELTRNLLH NAIKQSPRGG ALLVMVRSDG PEAVLTVRDQ GPGIAAELRQ RLFAPFSAGD
TASGSGLGLA ICREIVLALG GRISLDNRSA QENSAQVIGL DAVVRLPLFH HNA
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