Gene Vapar_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3009 
Symbol 
ID7973729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp3166420 
End bp3166956 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID644793594 
Producthypothetical protein 
Protein accessionYP_002944895 
Protein GI239815985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.823092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTC CAGAATCCTC GGTCTCGCCG CAAGCTGCGG CCACGTGGCC GCAAACATTG 
GTCGGGGCCG GCGTGCTGCT GACCGGCTTG GCGCTGGCTT TCGGCGCCAT CGGCATTTCT 
TCCGAGGCCG GCTATGGCGG CGTCGGGCCC AACTTCCTGC CCTGGCTGGT GTCGGGCGTG 
CTCACGCTGT GCGGCGCCTG GATTCTCTGG GAAGCGCGCA CCGGCGGCTT TCGCGAGCTC 
GACGCACCCT CGGGCGCGGA GCATGCCTAC TGGCCGGGCT TCGTCTGGGT GTCGGCCGGC 
CTGCTGCTCA ATGCGGCGCT GATCACCATG CTGGGCTTCA TCCTGAGCTG CACGCTGTGC 
TACGTGCTGG CGGTGCAGGG CCTGCGCCGC GCGAGCGGCC ATCCCTCGGC CAACCAGCCG 
CGCACCTGGG CCATCGACCT TGTGACCGGC GCGCTCATCT CGGCGCCCGT GTTCTGGATG 
TTCACCAAGT TCCTGGCCAT CAACCTGCCG GGCCTCACGA CCACCGGCTG GATCTGA
 
Protein sequence
MTTPESSVSP QAAATWPQTL VGAGVLLTGL ALAFGAIGIS SEAGYGGVGP NFLPWLVSGV 
LTLCGAWILW EARTGGFREL DAPSGAEHAY WPGFVWVSAG LLLNAALITM LGFILSCTLC 
YVLAVQGLRR ASGHPSANQP RTWAIDLVTG ALISAPVFWM FTKFLAINLP GLTTTGWI