| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3008 |
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| Symbol | |
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| ID | 7973728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3164904 |
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| End bp | 3166418 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793593 |
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| Product | protein of unknown function DUF112 transmembrane |
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| Protein accession | YP_002944894 |
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| Protein GI | 239815984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTT TCAACGCACT CATGATGGGT TTCGCCGCGG CGATCACCCC CGTCAATCTT
CTCTGGTGCC TGGTGGGCTG CGCCCTGGGC ACGGCCGTCG GCGTGCTGCC GGGCATCGGC
CCGGCCGTGG CGGTGGCCAT GCTGCTGCCG ATCACCGGCA AGGTCGACAT CACGGCCTCG
ATGATCTTCT TCTCGGGCAT CTACTACGGC GCCATGTACG GCGGCTCGAC CACGTCCATC
CTGCTCAACA CGCCCGGCGA AACCGCCAGC ATGGTGACGG CGATGGAAGG CAACAAGATG
GCCAAGAGCG GCAGGGCGGG CGCAGCGCTG GCCACCGCCG CCATCGGCTC CTTCGTGGCC
GGCACCATCG CCACCGTGAT CGTCACGCTG TTCGCGCCGT TCGTGGCCGA GTTCGCCGTG
AAGCTCGGGC CGCCCGAGTA CTTCCTGCTG ATGCTGCTGG CCTTCACCAC CGTGAGCGCG
GTGCTCGGCA AGAGCACGCT GCGCGGCATG ACGGCGCTGT TCATCGGCCT GGCGGCCGGC
TGCGTCGGCC TCGACCAGAT CTCGGGCCAG GGCCGCTACA CCGGCGGCAT TCCCGAACTG
CTCGACGGCA TCGAGATTGT GCTGGTGGCC GTGGGCCTGT TCGCGGTGGC CGAAGTGCTG
TACGCCGTGC TCTACGAGGG CAAGGTGGTC GAGGCCCAGA ACAAGCTGAC CCGCGTGCAC
ATGAGCAAGC GCGACTGGAA GCGCTCGATT CCGGCATGGC TGCGCGGCAC CGCCATCGGC
ACGCCGTTCG GCTGCATTCC CGCGGGCGGC ACCGAGATTC CGACCTTCCT GAGCTATGCG
ACGGAAAAGA AGCTGGCCAA GGATGCCGAC GCCAAGGCCG AGTTCGGCAC CACCGGCGCC
ATCGAAGGCG TGGCCGGCCC CGAAGCGGCC AACAACGCCA CGGTGACCGC GGCGCTGATC
CCGCTGCTCA CGCTCGGTAT TCCCACGTCG AACACCACCG CCATCCTGCT GGGTGCGTTC
CAGAACTACG GCATCCAGCC GGGGCCGCAG CTGTTCACCA CCTCGGCCGC GCTGGTGTGG
GCGCTGATCG CCTCGCTTTA CATCGGCAAC GTGATGCTGC TGGTGCTGAA CCTGCCGATG
GTGGGCCTGT GGGTCAAGCT GCTGAAGATT CCCAAGCCGC AGCTCTACGC CGGCATCCTG
ATCTTTGCGA CGGTGGGTGC CTACGGCATG CGCCAGAGCG CATTCGACCT GTTCCTGCTC
TACGGCATCG GCCTGCTCGG CGTGGCGATG CGGCGCTTCG ACTTTCCGAC CGCTCCCGTG
GTGGTGGGCA TGATCCTCGG GCCGCTGGCC GAAGCGCAGC TGCGCAATGC GATGTCCATC
GGGGAGGGCA GTGCCGTGGT GTTCTTCCAG CGGCCGATGT CGATCACGCT GGTGGTTGTC
ATTGTGGCTG TGCTGGTGTT GCCGCGGGTT GCGAAGCGGA TGAGTGAGCG CAAGTTGGCC
AGGCTGGCGG CCTGA
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| Protein sequence | MDIFNALMMG FAAAITPVNL LWCLVGCALG TAVGVLPGIG PAVAVAMLLP ITGKVDITAS
MIFFSGIYYG AMYGGSTTSI LLNTPGETAS MVTAMEGNKM AKSGRAGAAL ATAAIGSFVA
GTIATVIVTL FAPFVAEFAV KLGPPEYFLL MLLAFTTVSA VLGKSTLRGM TALFIGLAAG
CVGLDQISGQ GRYTGGIPEL LDGIEIVLVA VGLFAVAEVL YAVLYEGKVV EAQNKLTRVH
MSKRDWKRSI PAWLRGTAIG TPFGCIPAGG TEIPTFLSYA TEKKLAKDAD AKAEFGTTGA
IEGVAGPEAA NNATVTAALI PLLTLGIPTS NTTAILLGAF QNYGIQPGPQ LFTTSAALVW
ALIASLYIGN VMLLVLNLPM VGLWVKLLKI PKPQLYAGIL IFATVGAYGM RQSAFDLFLL
YGIGLLGVAM RRFDFPTAPV VVGMILGPLA EAQLRNAMSI GEGSAVVFFQ RPMSITLVVV
IVAVLVLPRV AKRMSERKLA RLAA
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