| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3007 |
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| Symbol | |
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| ID | 7973727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3163474 |
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| End bp | 3164295 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793592 |
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| Product | peptidase M55 D-aminopeptidase |
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| Protein accession | YP_002944893 |
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| Protein GI | 239815983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2362] D-aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCC TGATCTCCAC CGACATCGAA GGCGTTGCGG GCGTCTACCA CCACGAGCAG
GCGCGGCCCG GCAACCCCGA GTACGAACGC GCCCGCCTGC TGATGGCGCA CGAGGCCAGC
GCAGCCGTTG CCGGCGCCTT CGAGGCCGGC GCCACCGAGG TGCTGGTCAA CGATTCGCAC
GGCGGCTTTC GCAACATGCC GCCCGACGTG CTCGATGCGC GCGCCCGCGT GGTGCAGGGC
AAGCCGCGCT ACCTGAGCAT GGTGGCCGGC GTGGAGGAAG AAGGCGTGGA CGCCGTCTGC
ATGGTGGGCT ACCACTCGCG CGCGCAGGGA CGCGGCATCC TCGCCCACAC CATCAACAGC
TTTGCCTTTG CCGGCATCCG GCTCGGCGAG CAGGAACTGG GCGAGGCCGG GCTCTACGGC
GCACTGGCCG GCGAATATGG CGTGCCGGTG GTGATGGCCA GCGGGGACGA CGTGTTCATC
GCCGAGAACC GGGCGCTTTT TCCGCATGCG ACCTTCGTGC AGACCAAGCG TGCCACGGGG
TTCAACAGCG GGGTGTCGCT GTCACCCGAG CAGTCGCGCG ACGCCATCCG GGCGGGTGTG
GCCGAGGCGC TGGCTGCACG CGGTAATGCG AGGCCGCTGG TGTTCAAGGG TCCGCAGGTG
GTCACACTGC GCACGCAGTC GCCGATGATG GCAGATCTGT TCTGCCAATG GCCGTCGTTC
GAGCGCGTCG ACGGTGTCAC GTTGCGGTTT TCCGCCGAGA CGGTGGAAGC GGCTGTGCGG
ATGCTGAACT GCTGTTCGGC GATGTCTTCT ATGTTGCGTT GA
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| Protein sequence | MKVLISTDIE GVAGVYHHEQ ARPGNPEYER ARLLMAHEAS AAVAGAFEAG ATEVLVNDSH
GGFRNMPPDV LDARARVVQG KPRYLSMVAG VEEEGVDAVC MVGYHSRAQG RGILAHTINS
FAFAGIRLGE QELGEAGLYG ALAGEYGVPV VMASGDDVFI AENRALFPHA TFVQTKRATG
FNSGVSLSPE QSRDAIRAGV AEALAARGNA RPLVFKGPQV VTLRTQSPMM ADLFCQWPSF
ERVDGVTLRF SAETVEAAVR MLNCCSAMSS MLR
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