| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3001 |
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| Symbol | |
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| ID | 7973721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3155915 |
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| End bp | 3156877 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793586 |
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| Product | Beta-aspartyl-peptidase |
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| Protein accession | YP_002944887 |
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| Protein GI | 239815977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1446] Asparaginase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACA ACAGCATCAC GCCCGTCATC GCCATCCACG GCGGTGCCGG CACCATCAGC
GCCTCCACCA CCAGCGCGGC GCAGGCGCAG GCCTATCACG ACGCCTTGCG CAAGATCGTG
CAGGCCGCGC AGGCGCAGCT GCTCAAGGGC GCATCCGCGC TCGACGCGAC CTGCCTCGCG
GTCGAGCTGC TCGAAGAGTG CCCGCTCTTC AACGCGGGCC ACGGCGCAGT GTTCACGCAC
GAGGAAACCC ATGAACTCGA CGCCGCCGTG ATGGACGGCG CCACGCTCGC GGCCGGCGCC
ATTGCCGGCG TATGCCACGT GCGCCGCCCG GTGCGCGCCG CGCGTGCCGT GCTGGAAGAC
GGCGCCCATG TGCTGCTGGC CGGCGCGGGC GCCGAAGCCT TCGCGCGCGA GCACGGCCTT
GAAATGGTCG AGCCCTTCTT CTTCTCCACC GAGGCGCGGC GCCAGCAGCT CTACCGCGTG
CGCGACACCG GCCGCGTGGT GACGGACCAC GAAGGCGCGG CCATGACGCC GCCGCTCGAC
GAGGACAAGA AATTCGGCAC CGTGGGCGCG GTCGCGCTCG ACATGCACGG CCACCTGGCC
GCGGCCACCT CGACCGGCGG CATGACCAAC AAGCGCGTCG GCCGCATCGG CGATTCGCCG
CTGATCGGCG CCGGCACCTA TGCCGACGAC CGCACCGCCG CCGTGTCCTG CACCGGCAGC
GGCGAAATGT TCATCCGCGT CGCCGCCGCC TACGACATCT GCGCCCGCAT GGCCTATGGC
AGCGCCACGC TCGAAGCCGC CACGCACGCC GTGGTGCACC AGTCGCTGCC CGCCATCGGC
GGCACCGGCG GGCTGATCGC CATCGACCGC CACGGCAACC TGAGCCTCGC CTTCAACACC
GAAGGCATGT ACCGCGGCCA CGCGCGCGGC GACGAGGCAC CCGCAACAGC CATCTTCGCC
TGA
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| Protein sequence | MKNNSITPVI AIHGGAGTIS ASTTSAAQAQ AYHDALRKIV QAAQAQLLKG ASALDATCLA
VELLEECPLF NAGHGAVFTH EETHELDAAV MDGATLAAGA IAGVCHVRRP VRAARAVLED
GAHVLLAGAG AEAFAREHGL EMVEPFFFST EARRQQLYRV RDTGRVVTDH EGAAMTPPLD
EDKKFGTVGA VALDMHGHLA AATSTGGMTN KRVGRIGDSP LIGAGTYADD RTAAVSCTGS
GEMFIRVAAA YDICARMAYG SATLEAATHA VVHQSLPAIG GTGGLIAIDR HGNLSLAFNT
EGMYRGHARG DEAPATAIFA
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