Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2999 |
Symbol | |
ID | 7973719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3154255 |
End bp | 3154707 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644793584 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_002944885 |
Protein GI | 239815975 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.954217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACATC CCACGGTACC GGCTGCTGGG GCACGCTTGT CTCTTGCCGA GGTTGTTGCG CGGTCCGGCG CATCTGCGCA ACTGCTGCGC GACTGCGAGT CGCTCGGACT GCTCGACGGC ACGGCGCGTA CCGACGGCGA TGGCTGCCGC TATGACGAAC GCGCCGTGCC GACGCTGCGC TTCGTGCGAA GGGCGCACGC GCTGGGTTTC GAAACACCGG AGGTCGTCGA GCTGCACGCC TTGTGGCGCG ACGGACATCG CGCGAGCTTC GATGTGAAGC GCGTCGCGCT CGAGCGGGCC GACGACCTCG CGCAGCGGAT CGAGGAGCTG GCGCACATGC AGCGCCTGCT GGAGCGCCTG GCCCATTGCT GCGAAGGCGA CGAGCGCCCG GAATGCCCGA TCCTGGATGA GCTGGCCGGG CTTGAGGGGT TCGCCGGCTG CGAGGCGCGG TGA
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Protein sequence | MEHPTVPAAG ARLSLAEVVA RSGASAQLLR DCESLGLLDG TARTDGDGCR YDERAVPTLR FVRRAHALGF ETPEVVELHA LWRDGHRASF DVKRVALERA DDLAQRIEEL AHMQRLLERL AHCCEGDERP ECPILDELAG LEGFAGCEAR
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