Gene Vapar_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2999 
Symbol 
ID7973719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3154255 
End bp3154707 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID644793584 
Producttranscriptional regulator, MerR family 
Protein accessionYP_002944885 
Protein GI239815975 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.954217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATC CCACGGTACC GGCTGCTGGG GCACGCTTGT CTCTTGCCGA GGTTGTTGCG 
CGGTCCGGCG CATCTGCGCA ACTGCTGCGC GACTGCGAGT CGCTCGGACT GCTCGACGGC
ACGGCGCGTA CCGACGGCGA TGGCTGCCGC TATGACGAAC GCGCCGTGCC GACGCTGCGC
TTCGTGCGAA GGGCGCACGC GCTGGGTTTC GAAACACCGG AGGTCGTCGA GCTGCACGCC
TTGTGGCGCG ACGGACATCG CGCGAGCTTC GATGTGAAGC GCGTCGCGCT CGAGCGGGCC
GACGACCTCG CGCAGCGGAT CGAGGAGCTG GCGCACATGC AGCGCCTGCT GGAGCGCCTG
GCCCATTGCT GCGAAGGCGA CGAGCGCCCG GAATGCCCGA TCCTGGATGA GCTGGCCGGG
CTTGAGGGGT TCGCCGGCTG CGAGGCGCGG TGA
 
Protein sequence
MEHPTVPAAG ARLSLAEVVA RSGASAQLLR DCESLGLLDG TARTDGDGCR YDERAVPTLR 
FVRRAHALGF ETPEVVELHA LWRDGHRASF DVKRVALERA DDLAQRIEEL AHMQRLLERL
AHCCEGDERP ECPILDELAG LEGFAGCEAR