| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2989 |
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| Symbol | |
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| ID | 7972265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3146402 |
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| End bp | 3147034 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793574 |
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| Product | thiosulfate reductase cytochrome b subunit (membrane anchoring protein) |
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| Protein accession | YP_002944875 |
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| Protein GI | 239815965 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.57185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA CCGCCATCGC AAGCACCGCA CCCGATGCCC GCCCCATCCA CCCGCTGTGG
ATGCGCATCA CGCACTGGCT CAATGCCCTT GCGGTGCTGG TGCTGGTGAC GAGCGGCTGG
CGCATCTACA ACGCATCGCC CCTCTTTGAA TTCCGCTTTC CGGGCGCGGT GACGCTGGGC
GGCTGGCTCG GCGGTGCGCT GCAATGGCAT TTCGCGGCCA TGTGGCTGCT GGTGTTCAAT
GGCTTGGTCT ACCTGGCGAT CAACATCGCG AGCGGCCGGC TGGCCGCCAG GTTCTTTCCG
GTCACGCCGG CCGGTGTCTG GCACGACGCG CTGGCCGCGC TCAAGGGCCG GCTCTCGCAT
GCCGACCCGC GCCGCTACAA CAGCGTGCAG AAGCTGGCCT ACCTGTTCGT GATGCTCGAC
ATCGCCGTGA TCGTGCTTTC GGGCCTCGTG CTGTGGAAGT CCGTGCAGTT CGCCGTGCTG
CGCGACTTGC TGGGCGGCTA CGAATTTGCG CGCCGCATCC ACTTCTTCGG CATGGCCTCG
CTGGTCGCCT TCGTCGCCCT ACACCTGGTG ATGGTGGCGC TGGTGCCCCG CACCCTTCTC
ACCATGATCC GCGGCCGCGC GCCAAAAGCC TGA
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| Protein sequence | MTSTAIASTA PDARPIHPLW MRITHWLNAL AVLVLVTSGW RIYNASPLFE FRFPGAVTLG
GWLGGALQWH FAAMWLLVFN GLVYLAINIA SGRLAARFFP VTPAGVWHDA LAALKGRLSH
ADPRRYNSVQ KLAYLFVMLD IAVIVLSGLV LWKSVQFAVL RDLLGGYEFA RRIHFFGMAS
LVAFVALHLV MVALVPRTLL TMIRGRAPKA
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