| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2987 |
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| Symbol | |
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| ID | 7972263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3144080 |
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| End bp | 3145576 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793572 |
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| Product | histidine kinase |
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| Protein accession | YP_002944873 |
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| Protein GI | 239815963 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.181014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTGGG CCAGTTGGGC CACGCTCTCG CGCCGCCTCT CGGTGGTGTT CGCGCTGCTG
CTGCTGGCCT GCTGCGGCGC CTCGGCCTGG CTGCAGGTGC GCGCGAGCGG GCTGCACGGG
CAGGAGGTGG TGCAGCGCCT GTCGATGGGG CTGGCGGCGC ACATCGCCGA GAACTCGGAG
CTGATGCGCC CCGGCGGCCT CAACCAGGCC GCGGTGAAGG ACCTGTTCGA CAAGCTGATG
GCGGTCAACC CCAGCGTGGA GGTCTACCTG CTGGGGCTGG ACGGCCGCAT CGAGGCCCAG
GCCGCGCCGC CCGGGCACCT GAAGCGCGAC CGTGTGGCAC TGGAGCCGAT CCGCAAGCTC
TTGTCAGGTG CTGCGCTGCC CATCGTGGGC GACGATCCGC GCAGCGCGGA TGCGGCCAAG
GTGTTCAGCG CCGCGCCGCT CAAGGTGGGC GGACGGGATG CGGGTTATGT CTACGTGGTG
CTGCAGGGCG AGGACTACGA CGCGCTGGCG GCCAGGCTCG CGGCCGACAA CCTCTTGCGC
ACCACGCTCT GGTCGATGGC GCTGGTGGCG TTGCTCGGCC TCATTGCGGG CCTGGCGGCG
TTCCGGCTCA TCACGCGGCC GCTGCGCGAG TTGACCCAGG CCGTCAAGCG CTTCGAGACC
GAAGGCCCGG CTTCGCCCGG GGGCGAGGCG CCCACCCTTG CGCGGCTCTC GCGCGGCGGC
GACGAGATCG CGCTGCTGGG CCAGGCCTTC ACGCAGATGA CGCGCCGCAT CGCCGAGCAA
TGGCGCGAAC TCACGCTTTC GGACCAGCAG CGCCGCGAGC TCTTCGCCAA CATCTCGCAC
GACCTGCGCA CGCCGCTCAC TTCGCTGCAC GGCTATCTCG AAACCCTGCT GCTCAAGGCC
GGCTCGCTGA GCGAAGAGGA GCGCCGGCGC TACCTGGAAA TCGCGCTCGG CCAGAGCCGC
AAGGTGGGCC GGCTCGCACA GGAGCTGTTC GAACTGGCGC GGCTCGAATA CGGCGTGGTC
AAGCCCGAGA AGGAGAACTT CGCGCTGGCC GATCTCGTGC AGGACGTGTT CCAGAAATTC
GAACTCGCGG CCGAGGCGCG CCACCAGCAG CTCAGGCCCG ACATCGCGCC GGGCCTGCCG
GTGGTGTCGG CCGACCTCGG GATGATCGAG CGCGTGCTGA CCAACCTGCT GGACAACGCC
ATCCGCCACA CGCCGGCCGG CGGCCAGATC GAGGTGCAGC TGCGGCCCGC CAGTTCGGGC
GTGGCGGTGC AGGTGAGCGA CACGGGCCCG GGCATTCCGG GCGAGCTGCA GAAGGGGCTC
TTCGTGCGCC CGGTGTTCTT GAGCGGGGCG CGCAGCGACG GTTCCGGCAG CGGCGGGCTG
GGCCTGGTGA TCGTGCAGCG CATCCTGCAG CTGCACGGCA GCGACATCCG GCTCGTGCAG
CAGCCCGACA AGGGGGCGGT GTTCCGCTTT CAGCTGGGCG GCGCCACGGC CGCCTGA
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| Protein sequence | MAWASWATLS RRLSVVFALL LLACCGASAW LQVRASGLHG QEVVQRLSMG LAAHIAENSE
LMRPGGLNQA AVKDLFDKLM AVNPSVEVYL LGLDGRIEAQ AAPPGHLKRD RVALEPIRKL
LSGAALPIVG DDPRSADAAK VFSAAPLKVG GRDAGYVYVV LQGEDYDALA ARLAADNLLR
TTLWSMALVA LLGLIAGLAA FRLITRPLRE LTQAVKRFET EGPASPGGEA PTLARLSRGG
DEIALLGQAF TQMTRRIAEQ WRELTLSDQQ RRELFANISH DLRTPLTSLH GYLETLLLKA
GSLSEEERRR YLEIALGQSR KVGRLAQELF ELARLEYGVV KPEKENFALA DLVQDVFQKF
ELAAEARHQQ LRPDIAPGLP VVSADLGMIE RVLTNLLDNA IRHTPAGGQI EVQLRPASSG
VAVQVSDTGP GIPGELQKGL FVRPVFLSGA RSDGSGSGGL GLVIVQRILQ LHGSDIRLVQ
QPDKGAVFRF QLGGATAA
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