| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2976 |
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| Symbol | |
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| ID | 7972252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3134326 |
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| End bp | 3135495 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793561 |
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| Product | alkanesulfonate monooxygenase |
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| Protein accession | YP_002944862 |
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| Protein GI | 239815952 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03565] alkanesulfonate monooxygenase, FMNH(2)-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.220885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATAT TCTGGTTTCT CCCCACCCAC GGCGACAGCC GCTATCTCGG CACCAGCGAA
GGTGCGCGGC CCATCGACCT GGCCTACCTG CAGCAGATCG CCGGCGCGGC CGACCAGCTC
GGCTACGAAG GCGTGCTGAT TCCCACCGGC CGTTCCTGCG AAGACCCGTG GGTGATCGCC
TCGAGCCTGA TCGGCGCGAC GAAGAATCTC AAGTTCCTGG TGGCGGTGCG CCCCGGCCTG
CACCAGCCCA GCCTGGCGGC GCGCATGGCC GCGACCTTCG ACCGCCTCTC GGGCGGCCGC
CTGCTGGTGA ACCTGGTCAC CGGCGGCGAT CAGTCCGAGC TCGAAGGCGA TGGCGTGTAC
CTCGACCATG CGCAGCGCTA CGAGCAATCG GCCGAGTTCA TCCGCATCTG GCGCGAGATC
CTTGCGCGCA GCCACAGCGG CCAAGCCTTC GACTACGAGG GCCGGCATCT GAGCGTGAAG
GGCGCGAAGC TGCTCTATCC GCCGGTGCAG GAGCCTTATC CGCCGGTGTG GTTCGGCGGC
TCGTCGGCCG CCGCGCACGA GCTTGCGGCC GAGCAGGTCG ATGCCTATCT CACCTGGGGT
GAGCCGCCCG CCGAGGTGGC CAGGAAGATC GCCGACGTGC GCAACCGCGC CGCGCGCAAG
GGCCGCACCG TGGAGTTCGG CATCCGGCTG CACGTGATCG TGCGCGAGAC CGAAGACGCC
GCATGGAAGG CCGCCGAAGA GCTGATCAGC CGCGTCGACG ACGAGACCGT GATCCGCGCC
CAGGCCGCCT TTGCCCGCAT GGATTCCGAA GGCCAGCGCC GCATGGCCGC GCTGCATGCG
GGCGGCGCCA GGCGTTCGCG CGCCGAGCTC GAGATTTCTC CCAACCTCTG GGCCGGCGTC
GGCCTGGTGC GCGGCGGCGC GGGCACGGCG CTGGTGGGCG ATCCCAAGAC GGTGGCGGCG
CGCATCGAGG AATACGCGGC GCTCGGCCTC GACAAATTCA TTCTCTCGGG CTACCCGCAT
CTCGAAGAGG CCTACCGCTT CGCCGAGCTG GTGTTCCCGC TGCTCTCGCG CAAGGCGCAG
TCGCGGCTCG CGGGCGGCTC GCTGAGCGGG CCGTTCGGCG AAGTCGTTGC CAATCTCGAT
GCGCCTTCGC GCCTCGCTTC CCAAAGCTAA
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| Protein sequence | MQIFWFLPTH GDSRYLGTSE GARPIDLAYL QQIAGAADQL GYEGVLIPTG RSCEDPWVIA
SSLIGATKNL KFLVAVRPGL HQPSLAARMA ATFDRLSGGR LLVNLVTGGD QSELEGDGVY
LDHAQRYEQS AEFIRIWREI LARSHSGQAF DYEGRHLSVK GAKLLYPPVQ EPYPPVWFGG
SSAAAHELAA EQVDAYLTWG EPPAEVARKI ADVRNRAARK GRTVEFGIRL HVIVRETEDA
AWKAAEELIS RVDDETVIRA QAAFARMDSE GQRRMAALHA GGARRSRAEL EISPNLWAGV
GLVRGGAGTA LVGDPKTVAA RIEEYAALGL DKFILSGYPH LEEAYRFAEL VFPLLSRKAQ
SRLAGGSLSG PFGEVVANLD APSRLASQS
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