| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2973 |
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| Symbol | |
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| ID | 7972249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3131646 |
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| End bp | 3132476 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793558 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944859 |
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| Protein GI | 239815949 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.493702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCTG TTCTGAAAGA CACACGGCCG CTGGCCATTG CGGGCGGCGT TCGCCTGGAG
GCGCGCGGGC TGCACAAGCG CTATGGCGAG CGCGAGGTGC TGCGCAACAC GCAACTCGCC
ATCGAGCCGG GGCAGTTCAT CGCCATCGTC GGGCGCAGCG GCTGCGGCAA GAGCACGCTG
CTGCGGCTGG TTGCGGGGCT CGAGAAGGCC AGCGCCGGCG GGCTCTACAC GGACGGCAAG
GCCATCGACG GCCTGCACGA CGACACCCGG ATCATGTTCC AGGAAGCGCG CCTCCTGCCC
TGGCGCCGCG TGCTCGACAA CGTGACGCTC GGCCTGCCCG CCGAGGCCAA GGCGCGCGGC
AAGGAGGTGC TCGCGCAGGT GGGCCTGGCC GACCGCGAGA ACGAATGGCC GGCGCGCCTG
TCGGGCGGCC AGCGCCAGCG CGTGGCGCTC GCACGGGCGC TGGTGCACCA CCCGCGCCTG
CTGCTGCTCG ACGAGCCGCT GGGCGCGCTG GATGCGCTCA CGCGCATCGA GATGCATCGC
CTCATCGAGA ACCTCTGGCA GCGCCACCGC TTCACCGCGC TGCTGGTGAC GCATGACGTG
CAGGAGGCCG TGGCGCTTGC AGACCGCGTG ATCCTGATCG AGGACGGGCG CATCGCACTC
GACGAGAACA TTGCGCTCGC CAGGCCGCGC TCGCAGGGCG ACCCGGCGTT CGCAGCCATC
GAGAAACGCA TCCTCGACCG CGTGCTGCAG AAGCCCGGCG AGGCCGAATC CGCCGCCACG
GACGCCAACT GGCTGCAGCC CTCGGCGCAC ACGCTGCGCT GGGCGATCTG A
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| Protein sequence | MNAVLKDTRP LAIAGGVRLE ARGLHKRYGE REVLRNTQLA IEPGQFIAIV GRSGCGKSTL
LRLVAGLEKA SAGGLYTDGK AIDGLHDDTR IMFQEARLLP WRRVLDNVTL GLPAEAKARG
KEVLAQVGLA DRENEWPARL SGGQRQRVAL ARALVHHPRL LLLDEPLGAL DALTRIEMHR
LIENLWQRHR FTALLVTHDV QEAVALADRV ILIEDGRIAL DENIALARPR SQGDPAFAAI
EKRILDRVLQ KPGEAESAAT DANWLQPSAH TLRWAI
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