Gene Vapar_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2968 
Symbol 
ID7972244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3126856 
End bp3127533 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content74% 
IMG OID644793553 
Producthypothetical protein 
Protein accessionYP_002944854 
Protein GI239815944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.491451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACG CCATCGCCTT CCTCCACACG GCGCAGGTCC ATGTGCCGAC CTTCGAGCGC 
CTGACCCGCG AGATCGCGCC CGAGTTGGAG GTGCGCCACC TGGTGATGGA GGAACTGCTG 
CACGAAGCCC GCGCCGTGGG CATCGACAAC CCGATGCTGG CCGCGCGCGT GCACGAGGCC 
ATGCGCGAGG CCGCCTCCGA GGGCGCCGCC GTGGTGGCGT GCACCTGCTC GACCATCGGC 
GGCATCGCGG AAAGGACCCC GACGGGCGGC GCCTTCGCGG CCCAGCGCAT CGACCGTGCG 
ATGGCCGACC GCGCCGTGCG CGCCGGCCCG CGCGTGCTGA TTGCGGCAGC GCTCGAAAGC 
ACGCTGGAGC CGACCACCGC GCTGCTTCTT TCGGCCGCCG CGCAGGCCGG CGTCGGCGTC 
CGGCCGAGCA CGCTGCTGGT CGCCGAGGCC TGGCCGCACT TCGAGGCCGG CGACAGCGCC 
CGCTACATCG AGATGCTGGC CAGCGCGATC CGCAGCGCCG CCATCGGCGC CGACGTGGTG 
GTGCTGGCGC AGGCCTCGAT GGCCCCTGTC GCGGATGAGC TCGCAGACCT CGGCATCGAA 
GTGCTCGGCA GCCCCGGCCC GGGCGTGGCG CATGCCGTGG CCACGCTGCG CGCCTCGCGC 
TCGGCGTGGG CGCCCTGA
 
Protein sequence
MNDAIAFLHT AQVHVPTFER LTREIAPELE VRHLVMEELL HEARAVGIDN PMLAARVHEA 
MREAASEGAA VVACTCSTIG GIAERTPTGG AFAAQRIDRA MADRAVRAGP RVLIAAALES 
TLEPTTALLL SAAAQAGVGV RPSTLLVAEA WPHFEAGDSA RYIEMLASAI RSAAIGADVV 
VLAQASMAPV ADELADLGIE VLGSPGPGVA HAVATLRASR SAWAP