Gene Vapar_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2966 
Symbol 
ID7972242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp3125165 
End bp3125722 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content64% 
IMG OID644793551 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_002944852 
Protein GI239815942 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.267455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA CCCGAATTGC CGTGATCGTC GGCAGCCTTC GCAAGGATTC GTTCAACCAG 
AAATTGGCCC TTGCGCTGGC GCACCTTGCG CCGCCGGACT TCACCTTCGA GCATTTGCGC 
ATCGACGACC TGCCCCTGTA CAACCAGGAC GACGACGGCA ACCAGGCGCC TTCGGTGAAG 
CGGCTCAAGA CCGAGATCGT GGCGGCCCAG GGCCTGCTGT TCGTTACGCC CGAATACAAC 
CGTTCGGTGC CTGGCGTGCT GAAGAATGCG ATCGACCATG CCTCGCGCCC CTACGGGCAG 
AGCGCCTGGG CCGGCAAGCC CGCGGGCGTG GTGGGCATTT CGGTGGGCGC CACCGGCACT 
GCGCTGGCGC AGCAGCACCT GCGCAACGTG CTGGCCTATC TCGACGTTCC GACCCTGGGC 
GCGCCGGAGA TCTTCCTGCA GTTCAAGGAC GACCTGTTCG ACGACAAGGG CCACATCGGC 
AATGAAGGCA CGAAGAAGTT CCTGCAGGGC TGGATGGACA AGTACGTGGC CTGGATCAAG 
AGCCACGCGG CAGCCTGA
 
Protein sequence
MSQTRIAVIV GSLRKDSFNQ KLALALAHLA PPDFTFEHLR IDDLPLYNQD DDGNQAPSVK 
RLKTEIVAAQ GLLFVTPEYN RSVPGVLKNA IDHASRPYGQ SAWAGKPAGV VGISVGATGT 
ALAQQHLRNV LAYLDVPTLG APEIFLQFKD DLFDDKGHIG NEGTKKFLQG WMDKYVAWIK 
SHAAA