Gene Vapar_2963 details

Gene Information

• Locus tag: Vapar_2963
• ID: 7972239
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 3122641
• End bp: 3123282
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644793548
• Product: Peroxidase
• Protein accession: YP_002944849
• Protein GI: 239815939
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACCC TGCGACTCGG CGACACAGCC CCCAATTTCA CCCAGGATTC CAGCGAAGGC 
CCCCTCGACT TCTACCAATG GGCCGGCGAT TCGTGGGTGG TGTTCTTCTC GCACCCGGCC 
GATTTCACGC CCGTGTGCAC CACCGAACTC GGCAAGACCG CGGCGCTGTC GGGCGAATTC 
GCCAAGCGCG GCGTGAAGCC CATCGCGCTG AGCGTCGACC CGGCCACCAA GCACAAGGAG 
TGGATCGGCG ACATCAACGA GACGCAGAAC ACCACCGTCA ACTTCCCGAT CATTGCGGAC 
CACGACCGCA AGGTGGCCGA CCTGTACGAC CTGATCCACC CGAACGCATC GGCCACGGCC 
ACGGTGCGCA GCGTGTTCAT CATCGACCCG AAGAAGGTGA TCCGCGCGAC CATCACCTAC 
CCGGCCTCGA CCGGCCGCAA TTTCGACGAG ATCCTGCGCG TGATCGATTC GCTGCAGCTC 
ACCGACAGCC ACAAGGTGGC CACGCCCGTG AACTGGAAGG ATGGCGACGA CGTGGTCATC 
ATCCCGAGCA TCCAGGACCC GGCCGAACTG GCGGAGCGCT TCCCCAAGGG CTTCAAGGCC 
GTGAAGCCTT ACCTGCGCAT CACGCCGCAG CCCAACAAGT AA 

 

Protein sequence

MATLRLGDTA PNFTQDSSEG PLDFYQWAGD SWVVFFSHPA DFTPVCTTEL GKTAALSGEF 
AKRGVKPIAL SVDPATKHKE WIGDINETQN TTVNFPIIAD HDRKVADLYD LIHPNASATA 
TVRSVFIIDP KKVIRATITY PASTGRNFDE ILRVIDSLQL TDSHKVATPV NWKDGDDVVI 
IPSIQDPAEL AERFPKGFKA VKPYLRITPQ PNK