Gene Vapar_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2936 
Symbol 
ID7972212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3090986 
End bp3091396 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID644793521 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_002944822 
Protein GI239815912 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.509394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTC CCATCGAGAA AACCGACGCC GAATGGAAAG CCCTGCTTGC CGAAAAAGGC 
GCCGAGCCCG CGGCCTTCGA GGTCACGCGC CACGCGGCCA CCGAACGCCC CTTCACCGGC 
AAGTACGAGG CGCACTGGGA CGACGGCACC TACCACTGCA TCTGCTGCGG CGCCAAGCTG 
TTCGAATCGT CCACCAAGTT CGACGCGGGC TGCGGCTGGC CCAGCTTCTC GCAAGAGGCG 
GTGCCGGGCG CCATCCGCAA CATCGTCGAC CGCTCGCACG GCATGGTGCG CACCGAGAAC 
GTCTGCGCCA ATTGCGGCGC CCACCTGGGC CACGTGTTCC CCGACGGCCC CACCGAAACC 
GGCCTGCGGT ACTGCATGAA CTCCGCCTCG CTCGATTTCA AGAAGAAATA A
 
Protein sequence
MTTPIEKTDA EWKALLAEKG AEPAAFEVTR HAATERPFTG KYEAHWDDGT YHCICCGAKL 
FESSTKFDAG CGWPSFSQEA VPGAIRNIVD RSHGMVRTEN VCANCGAHLG HVFPDGPTET 
GLRYCMNSAS LDFKKK