| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2935 |
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| Symbol | |
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| ID | 7972211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3089505 |
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| End bp | 3090989 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793520 |
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| Product | protein of unknown function UPF0061 |
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| Protein accession | YP_002944821 |
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| Protein GI | 239815911 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0397] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.185797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGC TTGCTGAAGA CACGGCCGCC GCGGACCTGG GATTGCGCTG GAAACCCGGA
TTCCGGGCGC TGGGCCCCGC CTTTCTCACC GAACTGCGGC CGACGCCGCT GCCCGATCCC
CCCTACTGGG TGGGCCACAG CGAGGCAGCG GCCCGCCTGC TCGGCCTGCC GGCCGATTGG
CGGCAATCGG AGGGCACGCT GGCGGCATTG ACCGGCAACC TGCCCGTCGC CGGAACGCTG
CCCTTCGCCA CCGTGTACAG CGGCCACCAG TTCGGCGTCT GGGCCGGCCA GCTCGGCGAC
GGCCGCGCCA TCATGCTTGG CGAAACCGAG GGCGGCCTCG AGGTGCAGCT CAAGGGCGCG
GGCCGCACGC CCTACTCGCG CGGCGCCGAC GGCCGCGCCG TGCTGCGCTC CAGCATCCGC
GAATTCCTCT GCAGCGAGGC CATGCACGGC CTGGGCATCC CAACCACCCG CGCGCTCTGC
GTCACGGGCT CCGACGCCCG CGTGTACCGC GAAATGCCCG AAACCGCCGC CGTCGTGACC
CGCGTGGCGC CCAGCTTCAT CCGCTTCGGC CACTTCGAGC ACTTCTCGGC CAGCCAGCGC
GATGCCGAGC TGCGCGCGCT GGCCGACTAC GTCATCGACC GCTACTACCC GGACTGCCGC
AGCACCAGCC GCTTCAACGG CAATGCCTAC GCGGCCTTCC TGGAAGCCGT GAGCGAGCGC
ACCGCCGCCC TGCTCGCGCA ATGGCAGGCC GTGGGCTTTT GCCACGGCGT GATGAACACC
GACAACATGA GCATCCTCGG GCTCACCATC GACTACGGGC CGTTCCAGTT CCTGGACGGC
TTCGATCCGC GCCACATCTG CAACCACAGC GACACCAGCG GCCGCTATGC CTTCAACCAG
CAGCCCAACG TGGCCTACTG GAACCTGTTC TGCCTGGCGC AGGCGCTGTT GCCGTTGATC
GGCGACCAGG AAATCGCCGT CGCCGCGCTG GAGTCCTACA AGACGGTGTT CCCGCGCGAG
TTCGAGAGCC GCATGCGCGC CAAGCTCGGC CTCGCGGAGC CGGCCGAAGG CGATCGCGCG
CTCATCGAGG GCGTGCTGAA GCTCATGGCC GCCGAAAAGG TCGACTACAC CATCTTCTGG
CGCCGCCTTT CGCAGCACAT GGCGGGCGGC AACGCTGAAC CCGTGCGCGA CCTGTTCCTG
GACCGTGCGG GCTTCGATGC CTGGCTGCTA TCCTTTTCAG AGCGGCACGC GCAATTGCCG
CGCGCCCAAG CCGCGGACCT GATGCTCAGA TCGAATCCGA AGTACGTCTT GCGGAACCAC
CTGGGCCAGC AGGCCATCGA AGCGGCCAGC CAGAAGGACT TCTCGGCTGT GGCAACCTTG
TTGGCGCTGC TCGAAACCCC ATTTGAAGAA CATCCCGGTG CCGATGCCTA TGCCGGGTTC
CCGCCCGACT GGGCCTCCAC GATCGAAATC AGCTGCTCAT CATGA
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| Protein sequence | MSLLAEDTAA ADLGLRWKPG FRALGPAFLT ELRPTPLPDP PYWVGHSEAA ARLLGLPADW
RQSEGTLAAL TGNLPVAGTL PFATVYSGHQ FGVWAGQLGD GRAIMLGETE GGLEVQLKGA
GRTPYSRGAD GRAVLRSSIR EFLCSEAMHG LGIPTTRALC VTGSDARVYR EMPETAAVVT
RVAPSFIRFG HFEHFSASQR DAELRALADY VIDRYYPDCR STSRFNGNAY AAFLEAVSER
TAALLAQWQA VGFCHGVMNT DNMSILGLTI DYGPFQFLDG FDPRHICNHS DTSGRYAFNQ
QPNVAYWNLF CLAQALLPLI GDQEIAVAAL ESYKTVFPRE FESRMRAKLG LAEPAEGDRA
LIEGVLKLMA AEKVDYTIFW RRLSQHMAGG NAEPVRDLFL DRAGFDAWLL SFSERHAQLP
RAQAADLMLR SNPKYVLRNH LGQQAIEAAS QKDFSAVATL LALLETPFEE HPGADAYAGF
PPDWASTIEI SCSS
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