| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2934 |
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| Symbol | |
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| ID | 7972210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3088363 |
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| End bp | 3089439 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793519 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002944820 |
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| Protein GI | 239815910 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.140341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCATG CCCAGCGCCG GCCGCAACGC CGGTCCGGCT GCGCGCAGCA GCCCGAGCTG
CGGACCAGTT CGGTCGCCTG GCTCGAAGGC GTGCTCTCGA TGTTCGAGGC CGAAGGAATC
GACGTGCCCT CGCTGCTGCG CGACGCGGGC TTCGACCCCG ATTCGCTGCA TCGGCAGAAC
ACCCGCATTC CGGTGGACGA GATCTCGGTG CTCTGGCAGC TGGCGGTGGC GCGCGCCGGC
AAGCCCACGC TGGGCCTCGC GCGCGACCTG GCCGCCACGC ACAGCAAGCT GGGCACGGTC
GGCCACGCCA TGGCCTGCAG CGCCGACCTG GGCGCGGCGC TCGCGCGGCT CACGCGCTAC
ATGGCGGTCA TCTCCGACGC GACCGCCTTC TCGCTGCAGC GCGAGGCGCG CGGCTGCTGG
ATGGTGATGG AGCACACCGG CGGCAGCCTG CCGATTCCGC GCCAGCGCGT CGAATACGCC
CTGCTGACCG TCTTCATGCA GTGCCAGTGG CTCACGCGGC GCGAGCTGCA GCCGCTGGCG
CTCGAATTCG TCTATCCGCC GCCCGCCGAC GACCGGCTGC ACCGCGAGGC CTTCGGCTGC
GCAATCCGCT ACAACGCGCC GGCCAACCGG CTGCTGCTGT CGGCGGCCGA CATGGCAATG
CCGCTGCCCA CCCACCACCC CACGCTGGGC GAGATGCAGG AGCACCTGCT GGACGAGCAG
CTGAATTTGC TGGGCCAGAC CACCACCAGC ACCCTGGTGT GCGCCGAGAT TGCACGCCGG
CTGCCGCAAG GCGAACCGCG CCGGCAGGAC GTGGCCGCGG GTCTCGGCCT CGCGGAGCGC
ACGCTGCAGC GGCGGCTGCA GCAGGAGTCG GTGTCGTTCC AGTCGCTGCT CGACCGCACC
CGCCGCGAAC TGGCGCAGCA GTACCTGGCG GAAGACCGCC ACACCCTCAC CGACGTGGCC
GACATGCTCG GCTTCGTCGA CAGCAGCAAC TTCTTCCGGG CCTGCAAGCG CTGGTTCGGG
CTGCCGCCCG CCCAATACCG GGCGCGCATC TGGGACACGC CGGCGCTGGC CCACTGA
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| Protein sequence | MPHAQRRPQR RSGCAQQPEL RTSSVAWLEG VLSMFEAEGI DVPSLLRDAG FDPDSLHRQN
TRIPVDEISV LWQLAVARAG KPTLGLARDL AATHSKLGTV GHAMACSADL GAALARLTRY
MAVISDATAF SLQREARGCW MVMEHTGGSL PIPRQRVEYA LLTVFMQCQW LTRRELQPLA
LEFVYPPPAD DRLHREAFGC AIRYNAPANR LLLSAADMAM PLPTHHPTLG EMQEHLLDEQ
LNLLGQTTTS TLVCAEIARR LPQGEPRRQD VAAGLGLAER TLQRRLQQES VSFQSLLDRT
RRELAQQYLA EDRHTLTDVA DMLGFVDSSN FFRACKRWFG LPPAQYRARI WDTPALAH
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