| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2933 |
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| Symbol | |
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| ID | 7972209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3086360 |
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| End bp | 3088162 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793518 |
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| Product | Carboxylesterase type B |
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| Protein accession | YP_002944819 |
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| Protein GI | 239815909 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2272] Carboxylesterase type B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0457474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAA CGGCCACGGC AGCGGCGGCG CGGGCGCTGG CCGCGGCGGC CTGCCTGGCC
CTCGCGGCCT GCGGCGGCGG CTCCTCGGGC GGGTCGTTCT CGTTCCTGCC GGCCGCGCCG
CCTGCACCGC CGCCGCCAGC CCCGCCGCCG CCGGCCGCCG ACGGTCCCAT GGTGCGCCAG
ACCACCGCCG GCAAGATCGA GGGCGTGGAC GACAGCGCCA GCTCGGGCAC CTGGTCCTGG
AAGGGCGTTC CCTTCGCGCA GCCGCCGGTC GGCGCGCTGC GCTGGCGTGC GCCGGTGGAA
CCCGAGGCCT GGAGCGGCAT CCGCCCGGCC GCGAAGTTCG GCAATGCCTG CCTGCAGATC
GGCCGGCTCT TCAGCCCCGG CGCCAACAAC ACCTACGACG CCACCATCGG CACCACGCTG
GGCAAGCCGG TCGGCAGCGA GGACTGCCTG TTCGTCAACA TCTGGCGGCC CGCGACGGAC
GAGCGGAACC TGCCGGTGCT GCTGTTCGTG CACGGCGGCA GCAATATTTC GGGCTACACG
GCCGATCCGC TCTACGACGG CGCCCGGCTC GCGAAGGCCG CCAACGCGGT GGTCGTCACC
GCCAGCTACC GCCTGGGCAT CCTGGGCTTC CTGAACATGC CGCAGCTGCG CCCGGGCGGC
AGCGCGGGCG ACGACTCGGG CAACTTCGCG CTGCTAGACA ACATGGCGGC GCTGCGCTTC
ATCAAGAACA ACATCGCGAA CTTCGGCGGC GATCCGGGCA ACGTCACGCT CTCAGGCGAA
TCGGCCGGCG CCACCAACCT GCTGGCGGTG ATGACCTCGC CGATGGCCAA GGGCCTGTTC
CACAAGGCCT TCGAGATGAG CGGCGGCATC TCGCTCGCGA GCAACCTGCC GCCAGGCACG
CTGCCGACCC TGGCGCCGGC AGCGGCTTCG CTCGCGCAGG GGCAGTCGAT CCTCGAGAAG
CTGCTCGTGG CCGACGGCAC CGCCGCCGAC GCGGCCGCCG CCAAGGCCTA CATCGGCACG
CGCACGCCGG CCCAGATTGC CGAGTACCTG CGCGCCCAGG AGGGTGGGGC GATGCTGGCC
ACGGTGGTTG CCAGCGGCCT GGGCAGCGTC GCGCCGATTC CCGACGGCAC GGTGCTGCCG
GCCGATCCGA TCGGCGCCAT CGCGGCCGGC AACTACGCCA AGGTGCCGAT GCTGGCCGGC
AACACGCGCG ACGAGGGCAA GCTCTTCGCC TCGCTGCTGG GAACCATCGG CTTCCCGAAG
CCGGGCTGGA TCGTCACCGA TGCCCAGCGC TTCTCGATGA TGTTCAACTT CGACCCCGAT
GCACCGCCCA CGCTCACGGT GGCCGACATC ATCGATGCGT CCTACCTTCC GGTAGACACG
CCCGGCACCG GCTACAACGC GGCCACCGCC GTCATCACGA AAGGCCTGTT CGAGGCCAAC
CGCGACAACC TGCTCAACAC CATGAAGACG CACCAGTCGA ACATCTGGCA CTACCGCCTG
GACTGGGCGC AGGAGCCCTC GCCGTGGAAC GACGTGTACG GGGCCGCGCA TGCCTTCGAC
CTGCCGTTCG TGTTCGGCAA CTTCAGCGGC TCGCTGCTCA GCAACGTGAT GGGCGGCAAG
GCCAACCAGG CGGGCCGGCT CGCGCTGTCC AGGGCGGTGA TGGCCAGCGT CGGCGCCTTC
ATGCGCAAGG GCGACCCGAA CACGCCCGAA CTTGGTGCAA CCTGGGCGAC ATGGCCGTCG
CAGCTGCGGC TCGACGCCAC GCCCTCGGCG GCCGTGGTCA CGCCGGCGCA GGCCGTGCCT
TGA
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| Protein sequence | MAATATAAAA RALAAAACLA LAACGGGSSG GSFSFLPAAP PAPPPPAPPP PAADGPMVRQ
TTAGKIEGVD DSASSGTWSW KGVPFAQPPV GALRWRAPVE PEAWSGIRPA AKFGNACLQI
GRLFSPGANN TYDATIGTTL GKPVGSEDCL FVNIWRPATD ERNLPVLLFV HGGSNISGYT
ADPLYDGARL AKAANAVVVT ASYRLGILGF LNMPQLRPGG SAGDDSGNFA LLDNMAALRF
IKNNIANFGG DPGNVTLSGE SAGATNLLAV MTSPMAKGLF HKAFEMSGGI SLASNLPPGT
LPTLAPAAAS LAQGQSILEK LLVADGTAAD AAAAKAYIGT RTPAQIAEYL RAQEGGAMLA
TVVASGLGSV APIPDGTVLP ADPIGAIAAG NYAKVPMLAG NTRDEGKLFA SLLGTIGFPK
PGWIVTDAQR FSMMFNFDPD APPTLTVADI IDASYLPVDT PGTGYNAATA VITKGLFEAN
RDNLLNTMKT HQSNIWHYRL DWAQEPSPWN DVYGAAHAFD LPFVFGNFSG SLLSNVMGGK
ANQAGRLALS RAVMASVGAF MRKGDPNTPE LGATWATWPS QLRLDATPSA AVVTPAQAVP
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