| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2919 |
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| Symbol | |
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| ID | 7972195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3069329 |
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| End bp | 3070123 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793504 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_002944805 |
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| Protein GI | 239815895 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC GCACCATCCA AAAACTGTTC GACCTCAGCG GCAAGACCGC CCTCATCACC
GGCGGCTCGC GCGGCCTGGG CCTGCAGATG GCACATGCGC TGGGCGAGGC CGGCGCGAAG
ATCATGCTGA GCTCGCGCAA GGCCGAAGAC CTGGAGCAGG CCGCGGCCGA GCTGCAATCG
GCCGGCATCG ACGCGCGCTG GATCGCGGCC GACTGCTCGA AGGAAGAAGA CACGCGCCGC
CTGGCCGACG AGACGCTGCA GCGCATGGGC GCGATCGACA TCCTCGTGAA CAACGCGGGC
GCCAGCTGGG GCGCGCCGGC CGAGAGCCAT CCGGTCGAGG CCTGGGACAA GGTGATGAAC
CTCAATGTGC GCGGCTATTT CATCCTCTCG CAGCATGTGG CCAACGGCTA CATGATCCCG
AAGAAGACGG GCCGCATCAT CAACATCGCC TCGATCGCGG GCCTCAACGG CAACCCGCCC
GAGATGCAGA CGCTGGCCTA CAACACCTCC AAGACCGCGG TGATCGGCTT CACGCGCACG
CTGGCCGCCG AATGGGGCAA GTACAACATC AACGTGAACG CGATCTGCCC GGGCTTCTTC
ATGACCAAGA TGGCCGCCGG GCTGATCAAG TCGCTTGGCG AGGAAAAGAT GGCCTCGCAT
GCGCCGCTCG GGCGGCTTGG CGACGACGAA GACCTGAAAG GCTTGACGCT GCTGTATGCG
AGCGATGCGG GCAAGCACAT TACCGGCCAG TGGCTGGCGG TGGATGGTGG TGTGAGCGTG
GTGCTCGGGG CCTAG
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| Protein sequence | MTARTIQKLF DLSGKTALIT GGSRGLGLQM AHALGEAGAK IMLSSRKAED LEQAAAELQS
AGIDARWIAA DCSKEEDTRR LADETLQRMG AIDILVNNAG ASWGAPAESH PVEAWDKVMN
LNVRGYFILS QHVANGYMIP KKTGRIINIA SIAGLNGNPP EMQTLAYNTS KTAVIGFTRT
LAAEWGKYNI NVNAICPGFF MTKMAAGLIK SLGEEKMASH APLGRLGDDE DLKGLTLLYA
SDAGKHITGQ WLAVDGGVSV VLGA
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