Gene Vapar_2911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2911 
Symbol 
ID7970800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3060742 
End bp3061773 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content70% 
IMG OID644793496 
Productaldo/keto reductase 
Protein accessionYP_002944797 
Protein GI239815887 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.187668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAC GCTTTCTCGG CCGCTCGGGC TTCAAGGTCC CCGCACTCGG CTTCGGCGCC 
GGCACTTTCG GCGGGCAGGG CCCGCTCTTC AGCGCCTGGG GCAACACCGA CGTGGAGGGC
GCACGCAGCA TCGTCGACCT GGCGCTGGAC GCCGGCGTGA CGCTGTTCGA CACGGCCGAC
GTGTATTCGA ACGGCGCGTC GGAATCGATC CTCGGCGCCG CGCTCAAGGG CCGGCGCGAC
AAGGCCATCA TCTCGACCAA GCTCGCGCTG CGCGCCGGCG ACGGGCCGAA CGACGTCGGC
GCCTCGCGCC ACCACCTGAT CGCCGCGACC GATGCCGCGC TCAAGCGCCT GGGCACCGAC
TACATCGACA TCCTGCAGCT GCACGCCTTC GACGCGATGA CGCCGGTCGA GATGGTGCTC
GACACGCTCG ACGACCTGGT GCGCGCCGGC AAGGTGCGGC TGATCGGCGC CTCGAACTTC
TCGGGCTGGC AGCTGATGAA ATCGCTCTCG GCCTCCGACC GGCTCGGGCT GCAGCGCTTC
GTGGCCAACC AGACCTACTA CTCGCTGATC GGGCGCGACT ACGAATTCGA GCTGATGCCG
CTGGGCCTGG ACCAGGGCCT GGGCGCCATC GTCTGGAGCC CGCTCGGCTG GGGCCGCCTG
ACCGGCAAGG TTCGCCGCGG CCAGCCGCTG CCCGCCGGAA GCCGCCTGCA TGAAACCGCC
GGCTTCGCGC CGCCGGTGGA CGACGAGCGC CTGTACCGCG TGGTCGATGC GATGGACCAG
GTGGCGGAAG AAACCGGCAA GACGCTGCCG CAGATCGCGC TCAACTGGCT GCTGCAGCGG
CCCACCGTGT CGAGCGTGCT GATCGGCGCG CGCAACGAGG AGCAGCTCAA GCAGAACCTC
GGCGCGCTCG GCTGGCAGCT CAGCGCGGAC CAGATCCAGC GGCTCGATGC GGCCAGCGCA
GTGACGCCGC CCTACCCTTA CTACCCGTAC CGGAACGGTC AGTTCGCCGA GCGCAGCCCG
GTGGCGGTGT GA
 
Protein sequence
MEQRFLGRSG FKVPALGFGA GTFGGQGPLF SAWGNTDVEG ARSIVDLALD AGVTLFDTAD 
VYSNGASESI LGAALKGRRD KAIISTKLAL RAGDGPNDVG ASRHHLIAAT DAALKRLGTD
YIDILQLHAF DAMTPVEMVL DTLDDLVRAG KVRLIGASNF SGWQLMKSLS ASDRLGLQRF
VANQTYYSLI GRDYEFELMP LGLDQGLGAI VWSPLGWGRL TGKVRRGQPL PAGSRLHETA
GFAPPVDDER LYRVVDAMDQ VAEETGKTLP QIALNWLLQR PTVSSVLIGA RNEEQLKQNL
GALGWQLSAD QIQRLDAASA VTPPYPYYPY RNGQFAERSP VAV