| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2908 |
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| Symbol | |
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| ID | 7970797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3057745 |
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| End bp | 3058503 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793493 |
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| Product | 2-keto-4-pentenoate hydratase-like protein |
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| Protein accession | YP_002944794 |
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| Protein GI | 239815884 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.357805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCC TCGCCAACGC CCTGATCCAG GCCCGCCAAA GCAACCAGAC GCTCGATGCC
ACGCCCTGGC TCAACACGCT GGAGACAGCC GACCAGGCCT ATGAAGTGCA GGACGCCGTC
GCTTCGGCGC TGGCCTGGTT CGGCGGCCAG ACCGTGCCCC GTTATTGGAA ATCCGGCGGC
GCCTCGCGCA GCGCCACGCT CACGCATGCG CCGCTGCCCC CGGCCGGCGT GCGCACGGGC
CCGGCGGATT TCGGCGACAT GGCCTTTCAC GTACCCGGCA TCGAGGCCGA GATCGCGCTG
CGCCTCGGGC AGGACGTGAC GCCCGCCATG GCCGCGAAGC TCGACCACGG CGATGCCGCT
TCGCTCATCG ATGCCATGTC CGTCTCGGTG GAAATCGTCG ATTCGCGCTG GCAGGACCTG
GCCGCCACGC CCGCCCTGCT GCGCCTGGCC GATTCGCAGG TGCACGGCGC GCTCGCCATC
GGCGAGTGGC AGCCCTATGC GGCGGTCGAC TGGGCTTCGC AGCGCTGCGA AACAAAAGTC
GGCAGCGCCG AAACCGTGGT GCGCGAAGGC ACCCATCCGC TGGCCAATCC GGCGTGGCTG
CTGCCGGCCT GGCTGCGCCA CGTCACGCGG CACGGGCAGA CCGCGCCGGC CGGCACCGTC
GTCACCACCG GCTCGTGGAT CGGCATCGTG CCCTGCCGCC GCGGCGATCA GGTGGCGGTG
GAGTTCGCGG GCATCGGCGC GCTGCGCTTG AGCGTGTAG
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| Protein sequence | MTALANALIQ ARQSNQTLDA TPWLNTLETA DQAYEVQDAV ASALAWFGGQ TVPRYWKSGG
ASRSATLTHA PLPPAGVRTG PADFGDMAFH VPGIEAEIAL RLGQDVTPAM AAKLDHGDAA
SLIDAMSVSV EIVDSRWQDL AATPALLRLA DSQVHGALAI GEWQPYAAVD WASQRCETKV
GSAETVVREG THPLANPAWL LPAWLRHVTR HGQTAPAGTV VTTGSWIGIV PCRRGDQVAV
EFAGIGALRL SV
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