| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2907 |
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| Symbol | |
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| ID | 7970796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3056438 |
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| End bp | 3057421 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793492 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944793 |
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| Protein GI | 239815883 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.59164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATGC AGAGACGTTC GCTGATCCAG GCCGCGGGAG CCGCGGCCGC CACGCTGGGC
GTACCCCGGC TCTTCGCGCA GGAGTGGCCT TCGGGGCCGG TGCGCATCGT GGTGGGCTTT
CCGCCCGGCG GCGGCACCGA TGCGCTCGCG CGCGTGGTGG CGCAGAAGCT CACGGTGATG
TGGAACCAGC AGGTCATCGT CGAGAACAAG GGCGGCGTGG CCGGCGTGCT GGCAGCCGAA
TACGTGTCGC AGCAGCCCAG CGACGGCAGC ACGCTGCTCA TGGCGCACAT CAACAGCCAT
GCGCTCGCGC CCAGCCTGCA GCCCAAGCTG CGCTACAGCG TGGAACGCGA CTTCGTGCCG
ATCGTGCTGG TGGGCGTCAC GCCCAACCTG CTGATCGCGA GCCCGGCGCA GAAGGCGCTC
ACGGTGAACG ACATCGTGGC CGCCTGCAAG GCCTCGCCCG GCACGGTGAG CTTCGGCTCC
GCGGGCGCGG GCTCGGCGCA GCACCTGGCG CTGGAGATGT TCAAGCTGCA GGCCCGGGTC
GATGCGCTGC ACGTGCCCTA CAAGGGCAGC GGCCCGCTGC TGGCCGACCT GATGGGCGGG
CAGATCCAGT ACAGCTTCGA GACCATGACC GCGGCCACGC CGCATGTGAA GAGCGGCCGC
GTGCTGGCCG TGGCGCAAAC GCGCACCAAG CGCGCCAAGG GCCACCCAAG CGTGCCGACG
ATGCAGGAGC AGGGCTTTGC GGGCTTCGAG GCCACCACCT GGTATGGGCT CGCAGGTCCG
GGCAAGCTGC CGCCGGCGAT TGCCGAGAAG GTGAACCGCG ACGTCAATGC CGTGCTCGCG
ATGCCCGACG TGCAGGAAAA GCTCGACACC TACGGCGCGG AAGATGGCGG CGGGTCGCAG
GACAAGTTCA AGCAGTTCAT CTCGACTGAG ATCACCAAGT GGGCGAAGGT GGTGAAGGAC
GGCAAGGTTC ATGTGGACAC TTGA
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| Protein sequence | MMMQRRSLIQ AAGAAAATLG VPRLFAQEWP SGPVRIVVGF PPGGGTDALA RVVAQKLTVM
WNQQVIVENK GGVAGVLAAE YVSQQPSDGS TLLMAHINSH ALAPSLQPKL RYSVERDFVP
IVLVGVTPNL LIASPAQKAL TVNDIVAACK ASPGTVSFGS AGAGSAQHLA LEMFKLQARV
DALHVPYKGS GPLLADLMGG QIQYSFETMT AATPHVKSGR VLAVAQTRTK RAKGHPSVPT
MQEQGFAGFE ATTWYGLAGP GKLPPAIAEK VNRDVNAVLA MPDVQEKLDT YGAEDGGGSQ
DKFKQFISTE ITKWAKVVKD GKVHVDT
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