| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2902 |
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| Symbol | |
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| ID | 7970791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3049393 |
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| End bp | 3050613 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793487 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002944788 |
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| Protein GI | 239815878 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.21173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCG CCCTTCCCCG CCCCTTTGCC TATCTCGCGT GGTCCAACCT CGCGGCGCAG
TCCGCCGAGC AGCTGAGCCT TGCGGCGGTG CCGCTGGTCG CGGTGCTCGT GCTGGGTGCC
GGGCCGGGCG AGATCGGCTT TCTCGCGGCC ATTCAGACGC TGCCTTTTCT GCTGTTGTCG
ATGCCGCTGG GCGTGCTGGC CGATCGCATC TCGCGGCAGC GGCTGATGGT CGCATCCGAG
GGGCTGCGCG CCGCCTCGCT GCTGGTGCTG CTGGCCATGG TGCTGGCGTC GAAACTCGGC
ATCGGCTGGC TCGCGGTGCT CGGGTTCCTG GGCGCGGTCG GCACCGTGGG CTTCAGCGTC
GCGGCGCCCG CGCTGGTGCC GTCGCTCGTG CCGCGCGATG CATTGGCGGC CGCCAACGGC
CGGCTGGAGC TTGCGCGCAG CGCCGCGTTC ACGGCCGGGC CTGCGCTGGC AGGCGCGCTG
GTCGCGTGGG CGGGTGCTTC GACGGCCTTC GTGCTGGCGG CCGTGCTGTC GATGTCGGCG
GTGGGCCTGC TGCTGCGCCT GGCCGAGGCG CCGCGCCCGG CTGCATCGCA GCGCCATCCG
CTGCTCGACG TGCGCGACGG CGCGCGCTTT GTCTGGCGGC ATGAATTGCT GCGGCCCATG
CTGATGACGG GCGCGGTCTT CAACATCTCG TGGTTCGTGC TGCAGGCCGG CTATGTGCCG
TATGCGGTGC GGGTGCTGGG CCTTGGCGCG CAGGCGGTCG GCTTCACGCT GGCGATGTAC
GGCTTGGGCA TGGTGGCGGG TGCGCTGCTG ACCTCGCGCG TGGTGGCTCG CCTGCCGTTC
GGCCGTGCGA TCCAGGTCGG GCCCGCGGTG TCGGTGGTGG CCGCGGCGGC CATGGCGGCC
ACGCTGGTGG TGCCGGCCGC ATCGCTGGCC GCGCTGTCGT TCTTTCTGTT CGGTGCCGGG
CCGATGGTCT GGACCATCAC CACCACCACG CTGCGGCAGA GCGTCACGGC CTCGGCGATG
CTGGGCCGGG TGTCGGCGGT GTTCCTCACG ATCAACGCGG GCGCCCGGCC GATCGGCGCC
GCACTCGGCG GCGCGGTGGG TGCCGCATGG GGCGAGCCGG CCTGCCTGCT GCTCGCGCTG
GCGGGCTTCG TGCTGCAGGC GGGAATCATT TTTGCCTCGC GCATCGCGGG GCTGCACCGG
CTGCCGGTTG CGGTGGCTTG A
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| Protein sequence | MKAALPRPFA YLAWSNLAAQ SAEQLSLAAV PLVAVLVLGA GPGEIGFLAA IQTLPFLLLS
MPLGVLADRI SRQRLMVASE GLRAASLLVL LAMVLASKLG IGWLAVLGFL GAVGTVGFSV
AAPALVPSLV PRDALAAANG RLELARSAAF TAGPALAGAL VAWAGASTAF VLAAVLSMSA
VGLLLRLAEA PRPAASQRHP LLDVRDGARF VWRHELLRPM LMTGAVFNIS WFVLQAGYVP
YAVRVLGLGA QAVGFTLAMY GLGMVAGALL TSRVVARLPF GRAIQVGPAV SVVAAAAMAA
TLVVPAASLA ALSFFLFGAG PMVWTITTTT LRQSVTASAM LGRVSAVFLT INAGARPIGA
ALGGAVGAAW GEPACLLLAL AGFVLQAGII FASRIAGLHR LPVAVA
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