| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2894 |
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| Symbol | |
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| ID | 7970783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3040413 |
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| End bp | 3041129 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793479 |
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| Product | Paraquat-inducible protein A |
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| Protein accession | YP_002944780 |
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| Protein GI | 239815870 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.174277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCAG GCGAATTCCA GGCGCCGGAC GACGCCGAAG CGCCGGTGGC CACGGCCAGC
GCGCTGGGCC TCGTGGCCTG CCCGCATTGC GATGCCGTCT GGCGCGGCGC TGCCGAGGGC
GAGCCCTGCG GGCGCTGCGG CACGCACCTG CACACGCGCA AGCCCTACAG CCTGAACCGC
ACCTGGGCCT TCCTCATTGC GGCATGCATC ATGTACATCC CGGCCAACCT GCTGCCGGTG
ATGATCACGC GCACGCTCTT CGGCGCGCAG TACGACACCA TCCTGAGCGG CGTCATCTAC
TTCTGGGTGT CGGGCGCCTA CGGGCTCGCG GCCATCATCT TCATTGCGAG CTTCCTGGTG
CCGCTGTTCA AGCTCACGGT GCTGATCCTG CTGGCCTTGC TGGCGCAGCG CGGCAGCAGC
TGGCGCCGGC CCGAGCGGGC CAGGCTCTAT CACATCATCG AGATCATCGG CCGCTGGTCG
ATGCTCGACG TGTTCGTGGT GTCGCTGCTC ACCGGCCTGG TGCAGATCCA GGGCTTTGCG
GTCATCAACG CGGGCGTCGG CATTGCGGCC TTCGGATCGG TGGTGGTGCT GACGATGCTG
GCCTCGCTGA GCTTCGACCC CAGGCTCAAC TGGGACAGCC GGCAGGAGCA GCAGCAGGAA
GCCGAACGGG AACGCCGGGA ACCGGCACGC GACAACAGGG AACACAAGCC AGCATGA
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| Protein sequence | MSAGEFQAPD DAEAPVATAS ALGLVACPHC DAVWRGAAEG EPCGRCGTHL HTRKPYSLNR
TWAFLIAACI MYIPANLLPV MITRTLFGAQ YDTILSGVIY FWVSGAYGLA AIIFIASFLV
PLFKLTVLIL LALLAQRGSS WRRPERARLY HIIEIIGRWS MLDVFVVSLL TGLVQIQGFA
VINAGVGIAA FGSVVVLTML ASLSFDPRLN WDSRQEQQQE AERERREPAR DNREHKPA
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