| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2879 |
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| Symbol | |
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| ID | 7970768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3026417 |
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| End bp | 3027454 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793464 |
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| Product | Alcohol dehydrogenase GroES domain protein |
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| Protein accession | YP_002944765 |
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| Protein GI | 239815855 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.268542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACT GCGAAATCCA CGGCGCGCTC GACCTGCGCC TTGCCGAACG CCCGGCCGAA
CCGCTGGCGC CCACCCAGGT GCGCGTGGCC GTCAAGGCGG TCGGCATCTG CGGCTCCGAC
CTGCACTACT ACCGCCACGG CCGCGTCGGC GACTTCGTCA TCCGCGCACC GCTGACGCCG
GGGCACGAGG CCTCGGGCCA GGTCATCGAA GTGGGCGCGC AGGTGAGCTC GGTGAAGCCG
GGCGACCGCG TGGCCCTCAA CCCGTCGCGC ACCTGCGGCG TCTGCCGCTT CTGCCGCGCG
GGCGCTTCCA ACCACTGCGA GAACGTGCAC TTCTTCGGCA GCGCCAGCCG CTGGCCCCAC
ATGCAGGGCG CGATGCGCGA GCAGGTGGTG GTGGAGGCCA CGCAGTGCCT CATCGTGCCC
GACACGCTGT CGTTCGAGCT GGCCGCCTTC GGCGAGCCGC TGGCGGTGGC ACTGCATGCG
GTGCAGGAGG CCGGCTCGCT GCTCGGCAAG ACAGTGATGG TGGTGGGCGC GGGGCCGATC
GGCGCACTGA TCCTCATGGC CGCGAAGCTC GCGGGCGCGA GCCAGCTGAT TGCGGTGGAC
ATCGTGGACG AGACGCTCGC GGCCTGCACC CGCGTCGGCG CGACGCGCAC CATCAACGCG
GCCACGCAGC CCGATGCGCT GCAGGCATTG GCCGCGGACA AGGGCCAGGT CGATGCGTGC
TTCGAGGTTT CGGGCCACTA CGGCGGCCTG GCCAATTGCA TCCGGTCGAC GCGCCCGCGC
GGCACCATCG TGCAGGTGGG CACGCTCGGC GGCCACAGCG AGGGCTGCCC GTTCAACCAG
GTCATGGTCA AGAGCCTGCA CCTGGTCGGC AGCTTCCGCT TCGTCGACGA ATACGCCTGG
GCGGTGGACT ACCTGAGCCG CGGCCTGCTG GACGTGTCGC CCCTGCTGAC CGAGGCGGTG
CCGGTGGCAC GCGTGCACGA CGCCTTCGCG CTGGCGGCGG ACCGGCACCG CGCGATGAAG
GTGCTCGTCA CGTTCTGA
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| Protein sequence | MLNCEIHGAL DLRLAERPAE PLAPTQVRVA VKAVGICGSD LHYYRHGRVG DFVIRAPLTP
GHEASGQVIE VGAQVSSVKP GDRVALNPSR TCGVCRFCRA GASNHCENVH FFGSASRWPH
MQGAMREQVV VEATQCLIVP DTLSFELAAF GEPLAVALHA VQEAGSLLGK TVMVVGAGPI
GALILMAAKL AGASQLIAVD IVDETLAACT RVGATRTINA ATQPDALQAL AADKGQVDAC
FEVSGHYGGL ANCIRSTRPR GTIVQVGTLG GHSEGCPFNQ VMVKSLHLVG SFRFVDEYAW
AVDYLSRGLL DVSPLLTEAV PVARVHDAFA LAADRHRAMK VLVTF
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