| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2873 |
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| Symbol | |
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| ID | 7970762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3020575 |
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| End bp | 3020982 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793458 |
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| Product | PilT protein domain protein |
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| Protein accession | YP_002944759 |
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| Protein GI | 239815849 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCTGC TGGACACCAA TGTCATCTCG GAACTGCGCC GGCCTCGTCC GCACGGTGCG
GTCGTCGCAT GGCTCGCGCC CATTGCCGAC AGTGACCTGC ACCTTTCCGC GGTGACGATC
GGCGAGATCC AGGCCGGCAT CGAAATCACG CGCGAGCAGG ATGCCGCCAA GGCCGCTGAG
ATCGAGCATT GGGCGGCCCT GGTGGCCGCC TCGTACAACG TCCTGCCCAT GGATGCAGAA
ACGTTCAGGC TGTGGGCTCG GCTGATGCAC CGCAGCTCGA ACACGCTCTA TGAGGACGCC
ATGATCGCCG CCACGGCAAA GCAGCATGGG CTGACGGTCG TGACGCGCAA CGTCGGCGAC
TTCGCGAGCT TCGGTGTCGA AGTCTTCAAT CCGTTCGGCG CAGCATGA
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| Protein sequence | MYLLDTNVIS ELRRPRPHGA VVAWLAPIAD SDLHLSAVTI GEIQAGIEIT REQDAAKAAE
IEHWAALVAA SYNVLPMDAE TFRLWARLMH RSSNTLYEDA MIAATAKQHG LTVVTRNVGD
FASFGVEVFN PFGAA
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