| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2859 |
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| Symbol | |
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| ID | 7970748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3004111 |
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| End bp | 3005133 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793444 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_002944745 |
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| Protein GI | 239815835 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCGCT TCTTCCTCAC GCTTTTCCTG CTCGCCGCCC TGGCTGCGCT CGGCCTTGGC
GCCGCCGGCC TCTGGTGGGT GCACCAGCCG CTCAAGCTGC CCGCGCCCAG CGTCGACCTG
TCCGTGGAGC CCGGCACCAC GCCGCGCGGC GTCGCGCAGG CGGTGGCCGA TACCGGCACC
GACGTGCAGC CGCAGATGCT CTATTTCTGG TTCCGCATTT CGGGGCAGGA CCGCCAGATC
CGCGCCGGCA GCTACGAGCT GGAGCGCGGC ATCACGCCCA AGATGCTGCT CAACGTGCTG
GTGCGCGGCG AGGAGGCCAC CCGCAGCCTG GTGCTGGTCG AAGGCTGGAA CATCCGCCAG
GTGCGCGCCG CGCTCGCCAA GGCCGAGCAG CTCAAGCCCG AAACCGTCGG CCTGCCAGAC
GATGCGCTGA TGGCCAAACT GGGCCGGCCC GGCGTGCATC CCGAGGGCCG CTTCTTCCCC
GACACCTACA CCTATTCGAA GGGCTCGACC GACATCGCGC TGCTGCAGCG CGCCATGCGG
GCCATGGACA AGAAGCTCGA AGCCGCGTGG GCTGCCCGGG CGGCCGATTT GCCGCTCCAG
TCGGCGGATC AGGCGCTGAT CCTGGCCAGC ATTGTCGAAA AGGAGACAGG AAAAGCCAAG
GACCGCGCCG AGATCGCCGC TGTCTTCGTC AACCGGCTGC GCGCCGGCAT GCCGCTGCAG
ACCGACCCGA GCGTGATCTA CGGCCTGGGC ACCGCGTTCG ACGGCAACCT GCGCAAGAAG
GACCTGCTGG CCGATACCCC CTGGAACACC TACACGCGCG GCGGCCTGCC GCCCACGCCC
ATCGCCATGC CGGGCAAGGC CGCGCTGCTG GCGGCGGTAC AGCCGGCGCA GAGCAAGTCG
CTGTATTTTG TGTCGCGCGG CGACGGCACC AGCCAGTTCA GCAGTTCGCT CGACGACCAC
AACCGCGCGG TCAACCGCTA CCAGCGCGGC GGCGGCGAAC CCAAACCGAA AGTTGCGCAA
TGA
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| Protein sequence | MRRFFLTLFL LAALAALGLG AAGLWWVHQP LKLPAPSVDL SVEPGTTPRG VAQAVADTGT
DVQPQMLYFW FRISGQDRQI RAGSYELERG ITPKMLLNVL VRGEEATRSL VLVEGWNIRQ
VRAALAKAEQ LKPETVGLPD DALMAKLGRP GVHPEGRFFP DTYTYSKGST DIALLQRAMR
AMDKKLEAAW AARAADLPLQ SADQALILAS IVEKETGKAK DRAEIAAVFV NRLRAGMPLQ
TDPSVIYGLG TAFDGNLRKK DLLADTPWNT YTRGGLPPTP IAMPGKAALL AAVQPAQSKS
LYFVSRGDGT SQFSSSLDDH NRAVNRYQRG GGEPKPKVAQ
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