Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2855 |
Symbol | |
ID | 7970744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3001127 |
End bp | 3001936 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793440 |
Product | hydrolase, TatD family |
Protein accession | YP_002944741 |
Protein GI | 239815831 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCACCG ATTCCCACTG CCACCTCACT TTCCCCGAAT TCGCGGACCA GATGCCGCAA ATCCGTGCCG CCATGGCCGA GGCGCAGGTC GACCGGGCCT TGTGCATCTG CACCAAGCTC GAGGAGTTCG ACGATGTGCA GGCGCTGGCC GCGCGCTATG ACAACTTCTG GGCCAGCGTG GGCGTGCACC CCGACAACGA GGACATCGCC GAGCCCACGG TGGACGACCT GGTGCGCCGC GCAGCCTTGC CCCGCGTTGT GGCCATCGGC GAAACCGGGC TCGACTACTA CCAGATGGAA GAGCGCAAGG GCGGGCGCAG CATCTCCGAC ATGGAGTGGC AGCGCGACCG CTTCCGCGTG CACATCCGCG CCGCGCAGCA AACCCGCATG CCGCTGGTCA TCCACACGCG CGAAGCCTCG GCCGACACGC TCGCCATCCT CAAGGAGGAG GGCGAAGACG GTGCCGGCAA GGCCGCGGGC GGCGTGTTCC ATTGCTTCAC CGAAACCGCC GAAGTGGCGC GCGCGGCGCT CGACCTGGGT TTCTACATTT CCTTTTCGGG CATCCTGACC TTCAAGAAGG CGCAGGACCT GCGCGACGTG GCGGCCTTCG TGCCGCTCGA CCGCATGCTG ATCGAAACCG ACAGCCCGTA CCTGGCGCCG GTGCCGTACC GCGGTAAGAC CAACAACCCC TCCTACGTGC CCTTTGTGGC CAAGCAGATC GCCGAACTGC GCAAGCTGCC GCTCGAAGCC GTGGCCGAGG CCACCAGCAG CAACTTCGAA ACGCTGTTCA AGGGCGTCAA AGCAACATGA
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Protein sequence | MFTDSHCHLT FPEFADQMPQ IRAAMAEAQV DRALCICTKL EEFDDVQALA ARYDNFWASV GVHPDNEDIA EPTVDDLVRR AALPRVVAIG ETGLDYYQME ERKGGRSISD MEWQRDRFRV HIRAAQQTRM PLVIHTREAS ADTLAILKEE GEDGAGKAAG GVFHCFTETA EVARAALDLG FYISFSGILT FKKAQDLRDV AAFVPLDRML IETDSPYLAP VPYRGKTNNP SYVPFVAKQI AELRKLPLEA VAEATSSNFE TLFKGVKAT
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