Gene Vapar_2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2855 
Symbol 
ID7970744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3001127 
End bp3001936 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID644793440 
Producthydrolase, TatD family 
Protein accessionYP_002944741 
Protein GI239815831 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACCG ATTCCCACTG CCACCTCACT TTCCCCGAAT TCGCGGACCA GATGCCGCAA 
ATCCGTGCCG CCATGGCCGA GGCGCAGGTC GACCGGGCCT TGTGCATCTG CACCAAGCTC
GAGGAGTTCG ACGATGTGCA GGCGCTGGCC GCGCGCTATG ACAACTTCTG GGCCAGCGTG
GGCGTGCACC CCGACAACGA GGACATCGCC GAGCCCACGG TGGACGACCT GGTGCGCCGC
GCAGCCTTGC CCCGCGTTGT GGCCATCGGC GAAACCGGGC TCGACTACTA CCAGATGGAA
GAGCGCAAGG GCGGGCGCAG CATCTCCGAC ATGGAGTGGC AGCGCGACCG CTTCCGCGTG
CACATCCGCG CCGCGCAGCA AACCCGCATG CCGCTGGTCA TCCACACGCG CGAAGCCTCG
GCCGACACGC TCGCCATCCT CAAGGAGGAG GGCGAAGACG GTGCCGGCAA GGCCGCGGGC
GGCGTGTTCC ATTGCTTCAC CGAAACCGCC GAAGTGGCGC GCGCGGCGCT CGACCTGGGT
TTCTACATTT CCTTTTCGGG CATCCTGACC TTCAAGAAGG CGCAGGACCT GCGCGACGTG
GCGGCCTTCG TGCCGCTCGA CCGCATGCTG ATCGAAACCG ACAGCCCGTA CCTGGCGCCG
GTGCCGTACC GCGGTAAGAC CAACAACCCC TCCTACGTGC CCTTTGTGGC CAAGCAGATC
GCCGAACTGC GCAAGCTGCC GCTCGAAGCC GTGGCCGAGG CCACCAGCAG CAACTTCGAA
ACGCTGTTCA AGGGCGTCAA AGCAACATGA
 
Protein sequence
MFTDSHCHLT FPEFADQMPQ IRAAMAEAQV DRALCICTKL EEFDDVQALA ARYDNFWASV 
GVHPDNEDIA EPTVDDLVRR AALPRVVAIG ETGLDYYQME ERKGGRSISD MEWQRDRFRV
HIRAAQQTRM PLVIHTREAS ADTLAILKEE GEDGAGKAAG GVFHCFTETA EVARAALDLG
FYISFSGILT FKKAQDLRDV AAFVPLDRML IETDSPYLAP VPYRGKTNNP SYVPFVAKQI
AELRKLPLEA VAEATSSNFE TLFKGVKAT