| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2846 |
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| Symbol | |
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| ID | 7970735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2993416 |
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| End bp | 2994228 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793431 |
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| Product | formate/nitrite transporter |
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| Protein accession | YP_002944732 |
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| Protein GI | 239815822 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.830845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTACC TGCAGCCTTC CGAATTCGTC ACCAAGATGG TGGACGCCGG TGAATCCAAG
ATCTTCATGT CCACGCGCGA CACGCTCATC CGCGCCTTCA TGGCGGGCGC GATCCTCGCG
CTGGCGGCGG TGTTCTCCGT CACCATCAAT GTGCAGACCG GCTATTCGAT CATCGGCGCG
ATCCTGTTTC CCGTCGGCTT CTGCATCCTT TACCTGCTCG GCTTCGACCT CCTGACCGGC
GTGTTCGTGC TGACGCCGCT CGCGCTGATC GACAAGCGGC CGGGCGTGAC CATCGGCGGC
GTGCTGCGCA ACTGGGGCCT GGTGTTCGTC GGCAATTTCC TCGGCGCCTT CACCGTGGCC
GTGCTGATGG CCATCGTCTT CACCTTCGGC TTCACCAGCC CGCCCGACAA GGTCGGCCAG
GTGATCGCCA CGATCGGCGA AGCTCGCACG CTCGGCTACT CCGCCCACGG CGCGGCGGGC
ATGCTGACGC TCTTCGTGCG CGGCATGCTG TGCAACTGGA TGGTGTCCAC CGGCGTGGTG
GGTGCGATGA TCTCCACTTC GGTGACTGGC AAGGTGCTGG CCATGTGGAT GCCGATCATG
GTGTTCTTCT TCATGGTGTT CGAGCACTCG GTGGTCAACA TGTTCCTGTT CCCCTCGGCG
CTGCTGATGG GCGGCAATTT TTCGATCATG GACTACATCA TCTGGAACGA GATCCCCACC
GTGCTGGGCA ACCTCGTCGG CGGCCTGTCG TTCACCGGCC TGACGCTGTA CGCGACGCAC
GTGCGCACGG CGCCCAAGCG CGTTCCGCGC TGA
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| Protein sequence | MAYLQPSEFV TKMVDAGESK IFMSTRDTLI RAFMAGAILA LAAVFSVTIN VQTGYSIIGA
ILFPVGFCIL YLLGFDLLTG VFVLTPLALI DKRPGVTIGG VLRNWGLVFV GNFLGAFTVA
VLMAIVFTFG FTSPPDKVGQ VIATIGEART LGYSAHGAAG MLTLFVRGML CNWMVSTGVV
GAMISTSVTG KVLAMWMPIM VFFFMVFEHS VVNMFLFPSA LLMGGNFSIM DYIIWNEIPT
VLGNLVGGLS FTGLTLYATH VRTAPKRVPR
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