| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2822 |
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| Symbol | |
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| ID | 7971035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2967370 |
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| End bp | 2968830 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793407 |
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| Product | cytochrome c oxidase accessory protein CcoG |
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| Protein accession | YP_002944708 |
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| Protein GI | 239815798 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0348] Polyferredoxin |
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| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.143047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCAT CCGCTCCCGT TTCCGCCGCA TCGGCCCAAG CCGGCCCCGG CACGCGCAAG
ATCATTCCGA TCGCGCCGGC CGAGAGCGAG TCGGTGGGCC TGTACGAGGC CTCCAAGAAG
ATCTATCCGC GCACCGTGCG CGGCATGTTC GCGCGCTGGC GCTGGGCCAT GGTCTTCCTG
ACCCAGCTGC TGTTCTACGG CCTGCCGTGG GCCCAGTGGG GCGAGCGGCA GCTGCTGCTG
TTCGACCTGG CCGCGCGGCG CTTCTACGTC TTCGGCCTGG TGCTGTATCC GCAGGACCTG
ATCTACCTCT CGGGGCTGCT GGTGGTGAGC GCGCTGGCGC TCTTTCTCTT CACCGCCGTG
GCCGGGCGGC TGTGGTGCGG CTATGCCTGC CCGCAGACCG TCTACACCGA GATCTTCATG
TGGGTGGAGC ACCGGATCGA GGGCAACCGC ACCGCGCGCA TGCGGCTGGA CGGGGAATCG
ATGTCGCTCG AGAAGCTGGT GAAGAAGTGG TTCAAGCACC TGGTGTGGAT CGGCATCGCC
ATGTGGACGG GCTTCAGCTT CGTGGGCTAC TTCACGCCGA TCCGCGAGCT GGGCATGGCC
TTCCTGCAGA CCCGGATGGG CTCGTGGGAA GTGTTCTGGG TGTTCTTCTA CGGCTTTGCG
ACCTATGGCA ACGCGGGCTT CATGCGCGAG CAGGTGTGCA AGTACATGTG CCCGTATGCG
CGCTTCCAGA GCGCCATGTT CGACCGCGAC ACGCTCATCG TCAGCTACGA CCCCAAGCGC
GGCGAGCCGC GCGCGCCCCG GCGCAAGGGC ATCGACCCGC GCAGCATGGC GCTGGGCGAC
TGCATCGACT GCGGGCTGTG CGTGCAGGTG TGCCCGACCG GCATCGACAT CCGCCAGGGG
CTGCAGCACG AATGCATCGG CTGCGGCCTG TGCGTGGATG CCTGCGACAC GGTGATGCAG
AAGATGGCCT ATGCGCCGCG GCTGATCCGC TACGACACGC AGAACGGCAT GGAGGCCGGA
TGGTCGCGCC GCCAGCTGCT GCGCCGGGTG CTGCGTCCGC GCGTGCTGGT CTACAGCGCC
ATCCTGTCGC TGCTGGTCCT CGGGCTGCTC GCGAGCCTCG TGGCGCGCAC GCCGCTGAAG
GTGGACGTGG TGCGCGACCG CGCCTCGCTG GCCCGCATCG TCGAGGACGG CCGGCTCGAG
AACGTCTACC GGCTGCAGAT CATGAACGCC ACCGAGGAGC CGCGCGACTA CCGCATTGCC
GCCCACGGCA TCGAGGGCCT GACCGTCTCG CCCGGCGCGG CGGTCGCGGT GGGTGCGGCG
CAGTCGCGCT GGGTCGCGGT GCGGCTGCAG GTGCCCTATG GCGCGGTGCC CGCCGGTTCG
CACACGGTGC ACTTCGACAT CCGGGACGAA CGCGGCGGTT TTCAGGTGTC GGAGAAAGCG
GTCTTCCTGG TGCCGCGCTG A
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| Protein sequence | MDPSAPVSAA SAQAGPGTRK IIPIAPAESE SVGLYEASKK IYPRTVRGMF ARWRWAMVFL
TQLLFYGLPW AQWGERQLLL FDLAARRFYV FGLVLYPQDL IYLSGLLVVS ALALFLFTAV
AGRLWCGYAC PQTVYTEIFM WVEHRIEGNR TARMRLDGES MSLEKLVKKW FKHLVWIGIA
MWTGFSFVGY FTPIRELGMA FLQTRMGSWE VFWVFFYGFA TYGNAGFMRE QVCKYMCPYA
RFQSAMFDRD TLIVSYDPKR GEPRAPRRKG IDPRSMALGD CIDCGLCVQV CPTGIDIRQG
LQHECIGCGL CVDACDTVMQ KMAYAPRLIR YDTQNGMEAG WSRRQLLRRV LRPRVLVYSA
ILSLLVLGLL ASLVARTPLK VDVVRDRASL ARIVEDGRLE NVYRLQIMNA TEEPRDYRIA
AHGIEGLTVS PGAAVAVGAA QSRWVAVRLQ VPYGAVPAGS HTVHFDIRDE RGGFQVSEKA
VFLVPR
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