| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2819 |
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| Symbol | |
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| ID | 7971032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2965637 |
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| End bp | 2966266 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793404 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_002944705 |
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| Protein GI | 239815795 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.165011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA AGACCCCCTC CCCAAGCGGC TTCACCCACG AGAAGGTGGA GACCAACAAC
CTGCTGATGA TCGTGCTGAT CCTCGTGGTC GTCGCCATCG GCGGCCTGGT CGAGATCGTG
CCGCTGTTCT TCCAGAAGTC GACCACCGAG CCGATCCAGG GCCTGAAGCC GAACACCGCG
CTGCAGTTGG CCGGCCGCGA CGTCTATCTG CGCGAGGGCT GCTACAACTG CCACTCGCAG
ATGATCCGGC CGTTCCGCTC GGAAACGCTG CGCTACGGCC ACTACTCGGT GGCCGGCGAG
TTCGTCTACG ACCATCCGTT CCAGTGGGGC AGCAAGCGCA CCGGCCCCGA CCTGCACCGC
GTGGGCGGCA AGTACAGCGA CGAATGGCAC CGCATCCACC TGAACAACCC GCGCGACCTG
GTGCCCGAAT CGAACATGCC GGCCTATGCC TGGCTGGACA AGACCCAGGT CGATGCCGAT
GCCGTTCCGC GCCACATGCG TGCGCTGCGC CAGGTCGGCG TGCCCTACAC GGACGAGGAG
ATCGCCCGTG CCGCCGACGA CGTGCGCGGC AAGACCGAGA TGGACGCCAC CGTGGCGTAC
CTGCAATCGC TGGGCCTCGC GCTCAAGTAG
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| Protein sequence | MTQKTPSPSG FTHEKVETNN LLMIVLILVV VAIGGLVEIV PLFFQKSTTE PIQGLKPNTA
LQLAGRDVYL REGCYNCHSQ MIRPFRSETL RYGHYSVAGE FVYDHPFQWG SKRTGPDLHR
VGGKYSDEWH RIHLNNPRDL VPESNMPAYA WLDKTQVDAD AVPRHMRALR QVGVPYTDEE
IARAADDVRG KTEMDATVAY LQSLGLALK
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