| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2815 |
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| Symbol | |
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| ID | 7971028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2961103 |
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| End bp | 2961546 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793400 |
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| Product | UspA domain protein |
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| Protein accession | YP_002944701 |
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| Protein GI | 239815791 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0183337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGC GCATTCTCGT GGCCACCGAC GGCTCCACGC TCTCGAAGAA GGCGGTCACA
AGCGCGATCG CCCTCGCGAG CCGGCACGAT GCCGACCTCG TCGCGCTCAC CGTGGTGCCG
CGTTACCCCA AGAGCTACTT CGACGGCGCC ATGTCCTTCT CGCCCGACGA CATCGCCCGG
GTCGAGAAGC AGTGGGCCGA CAAGGCGCAG GACATGCTCG ACGCCGTGGC CGCGCGCGCG
GTGGCGAGCG GCGTGCAGCT GAAGACCGCC ATCGCCAACT CGGACCTGGT GGCCGAATCG
ATCGTCGCCG CCGCAAAGAA GCACAAGTGC GACCTGATCG TCATGGCCTC GCACGGCCGC
AAGGGCATCA AGCGGCTGCT GCTGGGCAGC GAGACGCAGC ACGTGCTGAC GCACTCCACG
CTGCCCGTGC TGGTGCTGCG CTGA
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| Protein sequence | MYKRILVATD GSTLSKKAVT SAIALASRHD ADLVALTVVP RYPKSYFDGA MSFSPDDIAR
VEKQWADKAQ DMLDAVAARA VASGVQLKTA IANSDLVAES IVAAAKKHKC DLIVMASHGR
KGIKRLLLGS ETQHVLTHST LPVLVLR
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