Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2812 |
Symbol | |
ID | 7971025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2958019 |
End bp | 2958819 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644793397 |
Product | dethiobiotin synthase |
Protein accession | YP_002944698 |
Protein GI | 239815788 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00660538 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CGCCGGGTGC GCCGATGACC CGCCGCCGCT GGTTCGTCAC CGGCACCGAC ACGGGCGTCG GCAAGACGCT GGCCAGCAGC GCGATGCTGG GCCTGCTGGC CGCATCGGGC CTGCGGGCAG TCGGCATGAA GCCGGTGGCC GCGGGCCTGG AACGGATCGA TGGCGCCTGG CGCAACGATG ACGTCGAGCA GCTGCGCGCG GCCGGCAATG TCGATGCGCC GCTGGCCCTG CGCTGCCCGT ACTTGCTGCG CGCGCCGATG TCGCCGCACC TGGCGGCACG GGAGGAGGGC GTGCGCATCG AATTGCCGCC GCTGCTGTCG GCCTTCGCGG CGTTGTCGCA GCAGGCCGAC GCGGTGGTGG TCGAAGGCGT GGGCGGCTTC TGCGTGCCGT TCGGCGACGA CCTCGACAGC GCCGAGCTGG CCGTGGCGCT GGGACTGCCG GTGATCCTGG TGGTCGGGCT GCGCCTCGGT TGCCTGAACC ACGCGCTGCT CACGGCGGAA GCGATCCGCG CGCGCGGGCT CATGCTGGCA GGATGGATCG CGAGCACCAT CGAGCCGGAG ATGCTGGCGC CCGAAGCCAA TCTCCAGACG CTGCGCGGCC GGCTCGGTGC GCCGCTGCTC GGTGTGGTGC CGCACCTGGC GGAACCCTCG GCGGCCAGCG CCGCGCGGCA CCTCGACCTG CGCGCATTGC GCGCCACCGC GGCCTACGCC GCGCACCGGT CGGCGACGCC GGCCGAGCTC AGCCCCTCAG CGGCGCTGGC CGGCTTCAGC CACTCAGCCG CGCTGGCCTG A
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Protein sequence | MSAAPGAPMT RRRWFVTGTD TGVGKTLASS AMLGLLAASG LRAVGMKPVA AGLERIDGAW RNDDVEQLRA AGNVDAPLAL RCPYLLRAPM SPHLAAREEG VRIELPPLLS AFAALSQQAD AVVVEGVGGF CVPFGDDLDS AELAVALGLP VILVVGLRLG CLNHALLTAE AIRARGLMLA GWIASTIEPE MLAPEANLQT LRGRLGAPLL GVVPHLAEPS AASAARHLDL RALRATAAYA AHRSATPAEL SPSAALAGFS HSAALA
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