| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2808 |
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| Symbol | |
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| ID | 7971021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2954028 |
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| End bp | 2954741 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793393 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_002944694 |
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| Protein GI | 239815784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.347525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCATC GCAACGAAGC CACGGCCGCG CTGAAGGCGC TCAGCGTGGC GACCGACGCC
TGCCGCGAAT GCCCGCTGGG CGCGCATGCG ACCCAGTCGG TGTTCGGCGA AGGCCCGGTC
GGTGCGGCGC TGATGGTGGT GGGCGAGCAG CCCGGCGACA AGGAAGACCT GGTCGGCCGC
CCCTTCGTGG GCCCGGCCGG CAAGCTGTTC GACCGCGCAG TGGCCGAACT CGGCTGGTCG
CGCGAGAAGC TCTACGTGAC CAATGCGGTG AAGCATTTCA AGTACGAGCC GCGCGGCAAG
CGCCGCATGC ACAAGACCCC GGGCCAGCGC GAAGTGGATG CCTGCCACCA CTGGCTCGAA
AGCGAGATGG AGCTCGTGCA GCCGCGCGCC TGCATCGCGC TCGGCGGCAC GGCCGCGCGC
TCACTGCTCG GCCGGCCGGT CGCGGTGATG AAGGAGCGCG GCCAGTGGGT CGAGGATGCC
GCAACGGGCC GCCGCGTGCT GGTCACGCTG CATCCCTCCG CCCTGCTGCG CGGCGATCCG
CTGCAGCGCG AAGCGGCTTG GGAAGCCTGG CTCAAGGACC TGTCGATGGC TTCGGAGCTG
ATGAAGAAAG CCGGGGCCAG GCGCCCGGCC GAAAAACAGC CCGCCGCAAA AAAGCCGGCC
GCAAGGCCCG CCGCAAGTCA CGCGCGCCGC CGCGTGCGCA TGGTGATGGA ATAG
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| Protein sequence | MSHRNEATAA LKALSVATDA CRECPLGAHA TQSVFGEGPV GAALMVVGEQ PGDKEDLVGR
PFVGPAGKLF DRAVAELGWS REKLYVTNAV KHFKYEPRGK RRMHKTPGQR EVDACHHWLE
SEMELVQPRA CIALGGTAAR SLLGRPVAVM KERGQWVEDA ATGRRVLVTL HPSALLRGDP
LQREAAWEAW LKDLSMASEL MKKAGARRPA EKQPAAKKPA ARPAASHARR RVRMVME
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