Gene Vapar_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2783 
Symbol 
ID7970996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2930042 
End bp2930917 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content69% 
IMG OID644793370 
ProductABC-3 protein 
Protein accessionYP_002944671 
Protein GI239815761 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.314797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAG GTGCCTTGCT GGTCCAGCCC TTCTTGGAAT ACGGCTTCAT GCGCCGCGCG 
CTGGTGGCCA CGCTGGCGCT CGGCCTGGGC AGCGCGCCGA TCGGCACCTT GCTGGTGTTG
CGGCGCATGA GCCTGATGGG CGATGCGATG GGGCACGCGC TGCTGCCGGG TGCGGCGCTC
GGCTTTCTGT TTGCCGGCTT CTCGCTGGCG GCGATGAGCG CGGGCGGATT CTTCGCGGCG
CTCGCGGTGG CGCTGGCGGC GGGTTTCGTC ACGCGCGTGA CCTCGCAGCG GGAGGACGCG
AGCTTTGCGG CCTTCTACCT GATCGCGCTC GCGCTGGGCG TGCTGCTGGT GTCGACCCAC
GGCAGCAGCG TCGACCTGAT GCACATGCTT TTCGGCACCA TCCTTGCGGT GGACGACGCG
GCGCTGCTGC TGATGGCCGG CGTCGCTAGC CTGACCCTCG TTGTGCTGGC CGTGATCTAC
CGGCCGCTGC TCGTGGAATG CCTCGACCCG GGCTTCCTGC GCAATGTGGG CGGGCCCGGT
TCGCTGGTGC ATGGCGTCTT TCTGGTTCTT ACGGTTGCAA ACCTGGTGGC GGGCTTCCAG
GCGCTGGGCA CGCTGATGGC GGTCGGCTTG ATGATGCTGC CGGCCACCGC GGCGCGCTTC
TGGGCCGCCG AAGTCTGGAG CCTTGCGCTG GTTGCAGCCG GCATGGCGCT GCTGTCCGGC
TTTGCCGGGC TGCTGCTGTC CTTCCATGCG CAGTGGCCCT CGGGCCCCGC GATCGTGCTG
GTGGCGGGCG CGGCCTACCT GCTGTCGCTC GTGTTCGGAT CGCACGGCGG ACTGCTCGCC
CGGCTCCTGC GCCCACGTTC TCATCGAAAT GCCTGA
 
Protein sequence
MTAGALLVQP FLEYGFMRRA LVATLALGLG SAPIGTLLVL RRMSLMGDAM GHALLPGAAL 
GFLFAGFSLA AMSAGGFFAA LAVALAAGFV TRVTSQREDA SFAAFYLIAL ALGVLLVSTH
GSSVDLMHML FGTILAVDDA ALLLMAGVAS LTLVVLAVIY RPLLVECLDP GFLRNVGGPG
SLVHGVFLVL TVANLVAGFQ ALGTLMAVGL MMLPATAARF WAAEVWSLAL VAAGMALLSG
FAGLLLSFHA QWPSGPAIVL VAGAAYLLSL VFGSHGGLLA RLLRPRSHRN A