Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2783 |
Symbol | |
ID | 7970996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2930042 |
End bp | 2930917 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644793370 |
Product | ABC-3 protein |
Protein accession | YP_002944671 |
Protein GI | 239815761 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.314797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAG GTGCCTTGCT GGTCCAGCCC TTCTTGGAAT ACGGCTTCAT GCGCCGCGCG CTGGTGGCCA CGCTGGCGCT CGGCCTGGGC AGCGCGCCGA TCGGCACCTT GCTGGTGTTG CGGCGCATGA GCCTGATGGG CGATGCGATG GGGCACGCGC TGCTGCCGGG TGCGGCGCTC GGCTTTCTGT TTGCCGGCTT CTCGCTGGCG GCGATGAGCG CGGGCGGATT CTTCGCGGCG CTCGCGGTGG CGCTGGCGGC GGGTTTCGTC ACGCGCGTGA CCTCGCAGCG GGAGGACGCG AGCTTTGCGG CCTTCTACCT GATCGCGCTC GCGCTGGGCG TGCTGCTGGT GTCGACCCAC GGCAGCAGCG TCGACCTGAT GCACATGCTT TTCGGCACCA TCCTTGCGGT GGACGACGCG GCGCTGCTGC TGATGGCCGG CGTCGCTAGC CTGACCCTCG TTGTGCTGGC CGTGATCTAC CGGCCGCTGC TCGTGGAATG CCTCGACCCG GGCTTCCTGC GCAATGTGGG CGGGCCCGGT TCGCTGGTGC ATGGCGTCTT TCTGGTTCTT ACGGTTGCAA ACCTGGTGGC GGGCTTCCAG GCGCTGGGCA CGCTGATGGC GGTCGGCTTG ATGATGCTGC CGGCCACCGC GGCGCGCTTC TGGGCCGCCG AAGTCTGGAG CCTTGCGCTG GTTGCAGCCG GCATGGCGCT GCTGTCCGGC TTTGCCGGGC TGCTGCTGTC CTTCCATGCG CAGTGGCCCT CGGGCCCCGC GATCGTGCTG GTGGCGGGCG CGGCCTACCT GCTGTCGCTC GTGTTCGGAT CGCACGGCGG ACTGCTCGCC CGGCTCCTGC GCCCACGTTC TCATCGAAAT GCCTGA
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Protein sequence | MTAGALLVQP FLEYGFMRRA LVATLALGLG SAPIGTLLVL RRMSLMGDAM GHALLPGAAL GFLFAGFSLA AMSAGGFFAA LAVALAAGFV TRVTSQREDA SFAAFYLIAL ALGVLLVSTH GSSVDLMHML FGTILAVDDA ALLLMAGVAS LTLVVLAVIY RPLLVECLDP GFLRNVGGPG SLVHGVFLVL TVANLVAGFQ ALGTLMAVGL MMLPATAARF WAAEVWSLAL VAAGMALLSG FAGLLLSFHA QWPSGPAIVL VAGAAYLLSL VFGSHGGLLA RLLRPRSHRN A
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