| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2782 |
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| Symbol | |
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| ID | 7970995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2929243 |
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| End bp | 2929986 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793369 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944670 |
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| Protein GI | 239815760 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.433508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCCTC CCGCCATCCG GCTGACCAAC CTCACCGTGG CCTATCGCGG CCACCCGGCT
GTGCATCACC TGTCGGGGGA GTTCGCGCCG GGCTCGCTCA CCGCCATCGT CGGGCCGAAC
GGTGCGGGCA AGACCAGCCT GCTCGCCGCG ATCATGGGAC GCATCCGGCC GGCCGAGGGA
GGGGTCTCCT TCGATGGCGA CTCGCGCGAC CGCATCGCGT GGCTGCCGCA GCAGGCCGAG
ATCGACCGGA GCTTTCCGAT CCGGGTGTTC GACCTGGTGG CGCTCGGGCA CTGGGGAGGG
CTCGGCAGCT TCAAGGGCAT CGCCGCGCGG CAGCGCGATG CCGTGGGAGA CGCGCTCGAG
GCCGTCGGCC TTGGCGGCTT CCAGCGCTGC GGCATCGCCG AGCTGTCGGC GGGGCAGTTC
CAGCGCGTGC TCTTTGCGCG CGTGCTGCTG CAGGACGCAC CCGTGATCCT GCTGGACGAA
CCTTTCAACG CGATCGATGC GCGCACCACT GCCGACCTGC TGGCCGTGGT CGCGCGCTGG
CACGCGGAGG CGCGCACCGT GATTGCCGTG CTGCACGACC TCGAGCAGGT GCGCCTTCAT
TTCGACCGCA CCTTGCTCAT GGCAAGGCGC TGCGTGGCTT GGGGGCCGAC GGCCGAAGTG
CTGCATGCCG AGAACCTGTT CCGCGCGCGC CAGATGGCCG AGGCGTGGGA CGAGGATGCG
CCTGTCTGCA AGGAGGCTGC ATGA
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| Protein sequence | MPPPAIRLTN LTVAYRGHPA VHHLSGEFAP GSLTAIVGPN GAGKTSLLAA IMGRIRPAEG
GVSFDGDSRD RIAWLPQQAE IDRSFPIRVF DLVALGHWGG LGSFKGIAAR QRDAVGDALE
AVGLGGFQRC GIAELSAGQF QRVLFARVLL QDAPVILLDE PFNAIDARTT ADLLAVVARW
HAEARTVIAV LHDLEQVRLH FDRTLLMARR CVAWGPTAEV LHAENLFRAR QMAEAWDEDA
PVCKEAA
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